« Back to Malus domestica golden search


Detailed information on CNT30714905


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30547369Malus domestica goldenIpomoea triloba22.199.0291.0467forward
CNT30372997Malus domestica goldenArabidopsis thaliana22.199.2494.0367forward
CNT30629861Malus domestica goldenVigna unguiculata22.1914.1489.5567forward
CNT30232760Malus domestica goldenAnanas comosus22.1914.6991.0467forward

Expression of CNT30714905

Peptides detected in this lncRNA

>peptide 1 (33 aa)
MREAGFTEQRKPPALNSGRMTCRCTASPDCLMG*

Sequence

>CNT30714905
GCCGAGCTAAGTGACTCTTGCTTGTAACCCAAGTGGGGGCACCAAGGTGGTGGGACATCGGTTCGATCCATTTGGCAGGACTTGATGTTGCAATTTGCTG
GCTCGCCCGTTCCAAGTTGAGAGTTGGGCCCTGTGGTTCGGGCTTAAGCTTGGGCCGTGGCCCTTAGAGCGGAGGGCAATGCGTGAGGCTGGTTTCACAG
AGCAGCGAAAACCTCCCGCTCTCAACAGTGGAAGGATGACGTGTCGGTGCACCGCTAGCCCAGATTGTCTCATGGGTTGAAACCAGTTGAACCACCACCT
TT