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Detailed information on CNT30714892


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3088853Malus domestica goldenVigna radiata19.3733.3388.15135reverse complement
CNT30510842Malus domestica goldenSolanum lycopersicum19.825.3788.41138forward

Expression of CNT30714892

Peptides detected in this lncRNA

>peptide 1 (43 aa)
MDNNEYSCTISWWSRGMEESRLAERWLSFQGRGMLLIFEGKKG*

Sequence

>CNT30714892
GTGAAATTCTTTGTGTTTTTTTTTTTGTTCTCTCAATATGGAAATAGCTCAGATCATTGTCGAGAGGGAAACAACCCAGATCACTAGCCAGGGCCCCTAA
ATGACCGCTCAGTGATAAAGGAGGAAAGGGTGCAGAGACAGCCAAGAGGTACTCCTAGAAGCAACCACCCTTGAAAGTGTGTGTAATAACTCACTGATTG
AGCACTCTTGCACTGCCGAAGCTATACGGTGTAGAAATGCCTCTGTAGGGGAGTGTTCCGCCGCAGAAACGAGAATGTCGGCTTGAGTAACGCAAACATT
GGTCAGTATCCAATGCCCTGAGAACCTAAGGGTTCCTTTGCAAGGTTCATCCACAGAAGGTGAGTCAGGACCTAGGATCAAGCTGAAAGCAGTAGTCGAT
GGACAACAATGAATATTCCTGTACTATTTCTTGGTGGTCTCGAGGTATGGAGGAGTCTAGGTTAGCTGAAAGATGGTTATCATTTCAAGGACGCGGGATG
CTCTTAATTTTTGAGGGTAAAAAGGGGTAGAGAAAATAGCTCGAGTTAATGTTCGAGTACCAAACGCCATGACACTGAAGTAATCCATACCATACTCTTA
GGAAAAGATATATAGAGTAAAAAAAAGATATGGAGTTCGGAAGGGAGGGGGTTTTCTTCGGGCTTGAGAGAGGGAAATAGATAGAGCCCCGCAAGTT