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Detailed information on CNT30714890


BLAST search results

BLAST vs Swiss-Prot:
sp|O24339|CATA_SOLAP, E-value = 2e-60

BLAST vs NONCODE:
NONCQUT006985, E-value = 3e-43

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30674192Malus domestica goldenSetaria viridis29.5436.7384.3483forward
CNT30317874Malus domestica goldenCorylus avellana86.8310090.98244forward
CNT30708847Malus domestica goldenGlycine max63.718.6389.94179forward
CNT30398713Malus domestica goldenTriticum turgidum76.1678.6884.11214forward
CNT30567579Malus domestica goldenActinidia chinensis57.6547.2388.27162forward
CNT30238041Malus domestica goldenBrassica oleracea71.8926.5879.21202forward
CNT30668910Malus domestica goldenTriticum dicoccoides77.2277.2284.33217forward
CNT30611006Malus domestica goldenArabis alpina43.4240.1383.61122forward
CNT308572Malus domestica goldenZea mays77.9475.5286.3219forward
CNT30368346Malus domestica goldenSorghum bicolor76.878085.65216forward
CNT30359648Malus domestica goldenLactuca sativa78.6556.6787.78221forward
CNT3051600Malus domestica goldenAmborella trichopoda30.622.3484.8886forward

Expression of CNT30714890

Peptides detected in this lncRNA

>peptide 1 (92 aa)
LSGVKLHRKTTRIPQGFRAATLMDNSGETHNDRCLNSRGSKEVSTCKVRNIMSDLKETFCTGSPSMDNTLWDPFSIKVGEFLHQMVVLKQNRT

Sequence

>CNT30714890
CCTCTCTGGTGTAAAACTTCACCGCAAAACCACGAGGATCCCTCAGGGTTTCAGGGCTGCCACGCTCATGGATAACAGTGGAGAAACGCACAATGACAGG
TGTCTGAACTCCAGGGGCTCGAAGGAAGTCAGCACATGTAAGGTGAGAAATATCATGAGTGACCTCAAAGAAACCTTTTGCACTGGCTCCCCTAGCATGG
ACAACACGCTCTGGGATCCGTTCTCTATCAAAGTTGGCGAGTTTCTCCACCAGATGGTAGTCCTCAAGCAGAACCGGACCT