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Detailed information on CNT30714645


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30572839Malus domestica goldenVitis vinifera13.2828.887.572forward

Expression of CNT30714645

Peptides detected in this lncRNA

>peptide 1 (38 aa)
MWRTRKGLGSKYWCSEQKSSPHRHRNQVNPTFLQHPEH*

>peptide 2 (54 aa)
MAKHNVTFDVENSKRFGIKVLVLGAEEFAAPAPESGQPDLSPASRALIDHTPLQ*

Sequence

>CNT30714645
AGAAGGCGTGTAAAAGGGCATGCAAGCAACCATCCAGGGTATCGCAGCTATAAAGCCCCCGGTACTGAGTGATGGCTAAGCATAATGTAACGTTTGATGT
GGAGAACTCGAAAAGGTTTGGGATCAAAGTATTGGTGCTCGGAGCAGAAGAGTTCGCCGCACCGGCACCGGAATCAGGTCAACCCGACCTTTCTCCAGCA
TCCAGAGCACTGATTGACCACACACCTCTTCAATGATTCGTATGATCTCGCGATCTCCGACATCATCGTCTTCTAGAACGTCTCGGTTGGGGCCTCGAAG
CTGAAGGTGTGTCGAGGGGAGGTGAAGAGGGAGGAGATGGAGAAGTGGGTTGGGGGATTTTCTGGGTTTGTTTGGTAGTTTTTTTTATTTTATAAATAGG
GTAAATATTATTATATTTTAAATGCATAAAAATTATTATTTTTGCCACGTGGCACAAATGTGACAGCTACGTCAGCACAAATGTGGATCCTATATTTGCC
ACATCATCACTTAACGGTTTACTTAACAGATTTTCTAACGGA