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Detailed information on CNT30713541


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30505046Malus domestica goldenNicotiana attenuata33.958.1597.2673forward
CNT3047594Malus domestica goldenPrunus dulcis35.3510.8397.3776reverse complement
CNT30185636Malus domestica goldenSecale cereale32.094.4591.369reverse complement
CNT30294378Malus domestica goldenTriticum aestivum32.093.3891.369reverse complement
CNT30224357Malus domestica goldenHordeum vulgare32.094.5791.369reverse complement
CNT30257804Malus domestica goldenAvena sativa26.518.6589.4757reverse complement
CNT30667649Malus domestica goldenTriticum dicoccoides20.4714.1995.4544reverse complement
CNT30135270Malus domestica goldenLolium perenne32.092.0191.369reverse complement
CNT30705533Malus domestica goldenPrunus avium32.568.1497.1470forward
CNT30336888Malus domestica goldenCynara cardunculus33.952.2993.1573reverse complement

Expression of CNT30713541

Peptides detected in this lncRNA

>peptide 1 (35 aa)
TKQKMANSFILFLVNNKKKKNNSIRLNKNLINHLI*

Sequence

>CNT30713541
TAACTAAACAAAAAATGGCAAACTCTTTCATTCTTTTTCTGGTAAATAATAAAAAAAAAAAGAACAATTCTATAAGGTTGAATAAAAATTTGATTAATCA
TTTGATATAATTGCTATGCTTAGTGTGTGACTCGTTGGTTTTTTTTAGGGTTGGGATTCAAAAAAATGGACAGCCCATAGTACAAACTGATAACTATAGA
ACTAATAACCAACTA