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Detailed information on CNT30713527


BLAST search results

BLAST vs Swiss-Prot:
sp|P31926|SUS_VICFA, E-value = 5e-28

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30500405Malus domestica goldenCoffea canephora24.215.3286.8476forward

Expression of CNT30713527

Peptides detected in this lncRNA

>peptide 1 (52 aa)
PLVNQNIYKILILRRKKLHSKQPMLPPLYLLYKENFLFTPQLEEQTPPACGT*

Sequence

>CNT30713527
CCTTTGGTAAATCAAAATATATACAAAATCCTCATCCTGAGGAGGAAAAAACTCCACAGTAAACAACCAATGCTTCCGCCTCTTTATTTACTCTATAAGG
AAAACTTTCTCTTCACTCCACAGCTAGAGGAACAGACGCCGCCAGCTTGCGGAACTTGAGGGCGTAAAACATCTCCAGATAGCGGCGGCACTCCAGGCGA
TCAAGGTTCGAAACATCTTTCCAGAAGCCATAAACTCCAGTGAGTGTCAAGAGCCTCTCAGAGTAGATTTGCCATGTGTACCTAAACGAAAACAGAGCAG
AAATGTAAGATAAC