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Detailed information on CNT30713351


BLAST search results

BLAST vs Swiss-Prot:
sp|P13708|SUS_SOYBN, E-value = 1e-88

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30678205Malus domestica goldenSetaria viridis14.2524.2387.363forward
CNT3019859Malus domestica goldenCitrullus lanatus59.0534.380.46261forward
CNT30197818Malus domestica goldenPisum sativum6962.6379.02305forward
CNT30250827Malus domestica goldenAvena sativa16.0620.4685.9271forward
CNT3061548Malus domestica goldenArabidopsis lyrata64.9335.0482.58287forward
CNT30610552Malus domestica goldenGossypium raimondii90.0561.9979.65398forward
CNT30626879Malus domestica goldenDaucus carota60.1847.7678.57266forward
CNT30679535Malus domestica goldenTriticum urartu15.1625.8788.0667forward
CNT30478109Malus domestica goldenArabidopsis halleri3155.0281.75137forward
CNT30361762Malus domestica goldenSorghum bicolor18.3324.785.1981forward
CNT30621781Malus domestica goldenCajanus cajan57.4786.6983.07254forward
CNT3023679Malus domestica goldenPopulus trichocarpa36.8828.9583.44163forward

Expression of CNT30713351

Peptides detected in this lncRNA

>peptide 1 (67 aa)
INVVARYSIHNNLSRATLASGKCGQSTSHGLNDCQAESFIHSRLHKGSPGVTNVAVEFTIPHTVHLG*

>peptide 2 (42 aa)
MRSILTARSACRCRSTHTFSSTQPSPHCPWTRCGDHQQPQQG*

Sequence

>CNT30713351
GATCAATGTGGTAGCCCGATATTCCATTCACAATAATCTCAGCCGGGCCACCCTTGCAAGTGGCAAATGTGGGCAGTCCACAAGTCATGGCCTCAATGAC
TGTCAAGCCGAAAGCTTCATACACAGCAGGCTGCACAAAGGCTCCCCTGGTGTCACAAATGTAGCGGTAGAGTTCACCATTCCTCACACGGTTCATCTGG
GATGAGATCCATCTTAACTGCCCGTTCAGCTTGTAGGTGTCGATCAACTCATACATTTTCTTCAACTCAGCCTTCTCCTCATTGTCCTTGGACTCGTTGC
GGCGATCACCAGCAACCACAACAAGGTTAACCAACTCTCTAAGCTTGGCATTCTTACCATACCACTCGACAAGCCCGGTGATGTTCTTCACCCGGTCCAG
CCTTGCCATTGTGAAGATGATTGGCTTGTTCCTGTCCTTCAA