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Detailed information on CNT30713341


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9FF29|PR5K_ARATH, E-value = 2e-21

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30315005Malus domestica goldenCorylus avellana57.899.2480.61165forward
CNT3085819Malus domestica goldenVigna radiata23.865.1985.2968forward

Expression of CNT30713341

Peptides detected in this lncRNA

>peptide 1 (41 aa)
PPVTAVSWGHTEGLRGICRHSTSPPSISTTLDIEGRSLGFI*

>peptide 2 (84 aa)
PSHSRLLGAYRRPERHLQTFNISSKHFDNFGHRRAITWFHLNTPQGGYNHLSYYFLFLLCNIVHFQVISHNILIVYPYWEVDLA*

Sequence

>CNT30713341
CCCCCAGTCACAGCCGTCTCTTGGGGGCATACAGAAGGCCTGAGAGGCATTTGCAGACATTCAACATCTCCTCCAAGCATTTCGACAACTTTGGACATCG
AAGGGCGATCACTTGGTTTCATTTGAATACACCACAAGGCGGTTATAACCATCTTTCTTATTACTTTCTTTTCCTCCTCTGTAACATTGTCCATTTCCAA
GTCATTTCCCACAATATACTGATCGTATACCCATATTGGGAAGTAGATTTGGCTTGAATGCTCTACCGTTGGATTCAAATTCTTC