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Detailed information on CNT30713283


BLAST search results

BLAST vs Swiss-Prot:
sp|P93604|LRK10_WHEAT, E-value = 2e-125

BLAST vs NONCODE:
NONPOPT000734, E-value = 4e-55

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30314996Malus domestica goldenCorylus avellana23.5624.6486.94291forward
CNT30699090Malus domestica goldenQuercus lobata20.5764.6381.89254forward
CNT3069516Malus domestica goldenQuercus suber17.8970.1686.43221forward
CNT3090659Malus domestica goldenSolanum tuberosum9.4720.9383.76117forward
CNT30152410Malus domestica goldenPrunus persica28.1882.2786.78348forward
CNT30573490Malus domestica goldenVitis vinifera25.598.680.38316forward
CNT30707309Malus domestica goldenPrunus avium42.1967.3179.65521forward
CNT3026124Malus domestica goldenPopulus trichocarpa26.6447.3482.98329forward

Expression of CNT30713283

Peptides detected in this lncRNA

>peptide 1 (34 aa)
MPRAISCSLSQPRNEFLLSADEMKSCREPLGKNS*

>peptide 2 (76 aa)
MTHRSHFIYELFPISLGTVEDFDSNEEFRREHSFEDSSIGSFAQLVLELICNPLNICVRIPAWFECFVVLQESFNS*

>peptide 3 (35 aa)
AIASSSRCLAFLVVEPVGTKGLGGILKLSPPPSNI*

>peptide 4 (43 aa)
MEGRSDGCHWIHHSPIIASFFGILPSPSSPMWIRRSSPSSRRL*

Sequence

>CNT30713283
CAGCAATAGCTTCTAGCTCTAGGTGTCTTGCATTCCTAGTTGTAGAACCAGTAGGCACAAAGGGATTAGGCGGCATACTCAAGCTTTCTCCTCCTCCTTC
TAACATCTGAACCACTATTTTCATGGAAGGACGATCCGACGGGTGCCACTGGATACACCATAGCCCTATAATTGCAAGTTTCTTTGGAATTTTACCATCT
CCTTCTTCCCCAATGTGGATTCGTAGGTCATCCCCTTCCTCTAGAAGATTATAAATCCACTGTGGATAGTAAATTTCATTTGTAGTGTTATCCGTAATTG
AACCAATATTCTTCCTTCCTCCTACCATCTCAAGCAGTAGCATTCCAAAGCTATAAACATCTGCCTTGTACGACACATTTCCGAAATTCCTGGAGAACAC
TTCAGGTGCAATGTAGCCCATGGTCCCCCTTGCTGTAGTCATGGACACCAAGCTTTGATCCTTGGAACATAACTTGGCCAAACCAAAATCAGAAATTTTT
GGAGTGAAGTTTTGGTCTAGCAAAACATTATGGGGTTTGATGTCGAAATGCAGGATTCGTAGATCGCATCCCTGGTGAAGATATTCAATTCCTTTGGCTA
TGCCTAGGGCAATATCTTGTAGCTTATCCCAACCAAGAAATGAATTCTTACTATCTGCAGATGAAATGAAATCCTGCAGGGAACCATTGGGGAAGAACTC
GTAAACAAGAGCTCGTACAAATCCATCAGCACAAAATCCAACCAAGCGAGCCACGTTTACGTGGTGGATATGACCCATCGTTCGCACTTCATTTACGAAC
TCTTCCCCATCTCCCTTGGAACTGTTGAGGACTTTGACAGCAATGAAGAATTCAGAAGAGAGCATTCCTTTGAAGACAGTTCCATAGGCTCCTTCGCCCA
ACTTGTCCTTGAATTGATTTGTAATCCTCTTAATATCTGCGTACGAATACCTGCTTGGTTTGAGTGCTTTGTAGTCCTCCAAGAATCTTTCAATTCTTAA
TCGACTCTCTTTCTCCTTTCTATCAGCGCTATATACCCGATATGCTGCAATCGTCAGTAGAACAAGAAGCAAAGCACACAGGATTCCACCTGTAACCACT
TTTTTCCATGTGTTGCCTGTAGAAGATCATTGCGAATTTAAACGAGACTGTCAGGATTCTAGATTCTGGAAGAGAGTTTCAAAATAAACCCCAGAATCAA
TGGCATAAGTTCTCTTGCCACGGTCGCCAAGGCAG