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Detailed information on CNT30713193


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30406993Malus domestica goldenBeta vulgaris421.4584.3483reverse complement
CNT3044816Malus domestica goldenPrunus dulcis6.1756.1485.16128reverse complement
CNT30162096Malus domestica goldenPistacia vera6.0342.0998.4125reverse complement
CNT30401452Malus domestica goldenTriticum turgidum6.6633.598.55138forward
CNT30437461Malus domestica goldenAegilops tauschii6.6651.1198.55138reverse complement
CNT30704819Malus domestica goldenPrunus avium13.0788.5682.29271forward
CNT30331625Malus domestica goldenDioscorea rotundata5.6937.1197.46118forward

Expression of CNT30713193

Peptides detected in this lncRNA

>peptide 1 (37 aa)
MEISDSRVTSSGASLPSPSLSIKCLICLVCMYPNTTY*

>peptide 2 (36 aa)
MEISSDLNFSSPSASIASPFDFPEERFEVRFFSGSE*

>peptide 3 (33 aa)
MQKSTFTNQKQGNKNNQIVEGALAMLLHRTKSK*

>peptide 4 (36 aa)
MENQAPAHQSEEKNMNNPSLLFEDDKGKQIQSEAEP*

>peptide 5 (31 aa)
MSDLLGLHVSKHNVLVEDKLEMVTRKSDYKY*

>peptide 6 (33 aa)
MIKENRFNQRQNHKNPETNSNFPNSATTYNHRD*

>peptide 7 (29 aa)
MKMMVKRCTHKVMTRFRIVPPRKKKKVTN*

>peptide 8 (30 aa)
MQSYVLATTNYFFMYFIKNPNGVGSNSRIL*

Sequence

>CNT30713193
TGAGACCCAACAATAGATAACAGAAGTGCCAAAAGATTTAGAATAAAATTTGAGGCAGCATATACAAAACTCAGATTTCACAATCAGCAGCACACGGACA
CAGAAGACAGGAATGGTTTTTTAATTCATTGTCTCAAGGAACTCTAAGTCCATACACACAGTATTACTTGGTTTCTATTAATACGGGAACCGCCTGCACC
CTAGCCTTTAAGTTCTCCCATGGTAACCGGTAAGCCTCCAACTTCCGGTGACTCTGCATAGGAAATGGAGATCAGTTCAGACCTAAACTTCTCTTCTCCA
TCAGCATCTATTGCCTCACCATTCGACTTTCCAGAAGAGAGATTTGAAGTCAGATTCTTCTCTGGTTCAGAGTAAGAAATGGAAATAAGCGACTCACGAG
TCACTTCTTCAGGAGCCTCCTTGCCAAGTCCTTCTTTATCCATAAAATGTCTGATCTGCTTGGTCTGCATGTATCCAAACACAACGTATTAGTTGAAGAT
AAGTTGGAAATGGTGACAAGAAAATCGGATTATAAATACTAGTACAGCTATAATAACATACATTCACAAGAAGTTCATAATGCTACCACAATACTCTCAC
AAAGTTGTTCATTCGCAATAAAAAAGCATGCAGAAATCCACATTCACCAACCAAAAACAAGGAAACAAAAACAACCAAATTGTGGAAGGGGCACTGGCCA
TGCTGCTTCACAGAACCAAGTCGAAGTAACTCGGCAAAATGACCCCATAAGGGGTGCTCTCCTATCTTTTGATTAGGAAAGCAGCACATACCAGGGGGTA
GCGACTGTTTATTAAAAACACAGGACTCTGCTAAGTGGTAACACGATGTTTAGAGTCTGACACCTGCCCGGTGCTGGAAGGTCGGATCTTGGCTTTGATA
AATCATATTCTTAGCTGATATTAAGTGTTTTTCTACCACAACAGTATACGACAGCATGAGAGCATATTGCACAATAATAGAAATTCCCCCAATGATGTTC
AAATCAGAAAGGAAGACCTGAGAAAATCCATAACTACGGAAGAACATGAAACTGAGGTGAAAACCAAAATAATGAAGATGATGGTGAAAAGATGCACACA
CAAGGTAATGACTAGATTTCGAATTGTCCCTCCAAGAAAAAAAAAAAAGGTAACAAACTAGATTTCATAGCCACAGAAAGTAAATATTACTCTCAAGTTA
AACAAAAGAAGGGGCAGGGGTTCCAGATACGTCGAAACAAGAGGAAACATATAGGAAACATATAGGAAACTTATCCCTCCTCAAACACAAAGGAAACTGG
GAGCTCTGCAGCAAATAAATTTTCGATTCCCAGAAGTATAGAACCATTATCATTAAACAGCAGCACATAATATAAAACCCCAACAAGCTATTGAAAATCA
AGCACAAATTCCATATAAAATTGGATGCTATTAAGCTCTTAAGAAAGGAAATTAACATATAAGACTATAACCAGAAACCAATCTCTCCCACCACCACCAG
AAACATGTGATTTGAGGGTTTTTAGGCTTCATAATGCAGAGTTACGTCCTGGCAACTACCAACTACTTTTTCATGTATTTCATCAAAAACCCTAATGGCG
TGGGATCAAACAGCCGAATCCTGTAAAACTTGAATTTCTGAACCAATGCAAAATACGCACAAAGGGGCAAATCCCAGTAATCTAGATAAGTAGAAGCAGC
ATCATCTTCAAGCTACATACCCATCTTAATCTTTGAAAGTATACCTCCTTTCAATAATCCAATTAACTTGAAATTATCACTTCGAAAAAGAAAAACAACA
TCTATAACCATAAAGATTAAAAACTTTAACTTTAAAACATATGGAAAATCAAGCACCGGCCCATCAGAGCGAGGAGAAAAATATGAACAACCCAAGTCTT
CTTTTCGAGGATGATAAAGGAAAACAGATTCAATCAGAGGCAGAACCATAAAAACCCAGAAACAAATTCAAACTTCCCAAATTCTGCAACTACATATAAC
CATAGAGATTGAGCGGAAGAGAGAGAAAGAGAGAGAACCCAAACAAAATTCCAGAGAGAGAGAGAGAGAGATA