Detailed information on CNT30713137


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT005610, E-value = 9e-110

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30307873Malus domestica goldenTriticum aestivum14.2571.590.37301forward
CNT3036187Malus domestica goldenCucumis melo17.4740.8288.89369forward

Expression of CNT30713137

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MHAPLYKCCVQVPARIIGKDQTNLKRSHHTQ*

>peptide 2 (33 aa)
MEARVLYERAFRSISPRRLVHLSRIGGWLRNRI*

>peptide 3 (39 aa)
MCSTGRTPSFFPTSPLATVIPSKRYKLRCRMSTNLRSVP*

>peptide 4 (68 aa)
MELPEADREYVIFNFKPINVGSEKFLENNGLCLRFTRIHGKSLIHFSRPRKTGNTVIFDFRWGDRRLH*

>peptide 5 (44 aa)
MDSSSSQFGGCGHICANSGNGYKGEIERKLYPTGDGRKLVSYRG*

>peptide 6 (57 aa)
MQEEVLLGVCRGCVCSREWIPRQVSLVGADTFARIRVTATREKSKGNCIRPGMDVNS*

Sequence

>CNT30713137
TATGCAGGAAGAGGTGCTCCTAGGTGTGTGTAGGGGTTGTGTTTGTTCACGAGAATGGATTCCTCGTCAAGTCAGTTTGGTGGGTGCGGACACATTTGCG
CGAATTCGGGTAACGGCTACAAGGGAGAAATCGAAAGGAAACTGTATCCGACCGGGGATGGACGTAAACTCGTAAGCTACCGAGGGTAGGGATAATCGTC
CAGGTCTTATTGTGAAACAAAAAAGCCGCCCCGCCACGGCATGCGGGTTGGTTCCTCTGTCGTCGCCGGGGAGCTCTTAGTGCGGAGACCTTAGGATAAG
TTGCTAAAACAAACGGGAGGGGAGGATCGACCCGTTCAGTATAATTCCGAAGAAAGACTGTTGGCACCAGGTGTTGACATTTATTTTGCTCCCTTCAAAG
GGCAGGGTTAAGCTCGGCATAAGGTTAATAGGGTAGGGTCATGTCCTTAAGATTCAGATAAGAAAAGAGTTCCAAACCTTTATGCATGCGCCTCTGTATA
AGTGCTGCGTACAAGTTCCGGCTAGGATAATTGGGAAAGATCAAACCAATTTGAAGCGCTCACATCACACACAGTAGTAGTAGCGTAAAGGCCGTAAGTC
GGGGGCGGCCATAACATAAGGTTATTACTTTCACATCTCTCTTTAGATATCTTTAGATAGAGAGAGAGAGAGATCCGCTGCGCGAGCAACCCGACTGTGC
GTTACATGTGCTCTACAGGCCGCACTCCATCTTTCTTCCCAACGAGCCCATTAGCGACTGTAATCCCTTCTAAAAGGTACAAACTGAGATGCCGGATGTC
GACGAATTTGCGCAGTGTACCATAGTATCCTGTTACAGGGGTATACCTTACGTATAGAGAAATGGAAGCCAGGGTCCTCTATGAAAGAGCATTTAGAAGT
ATTTCACCTAGGCGACTCGTTCACCTATCACGAATAGGTGGGTGGCTGCGTAATAGAATATAACCTGCGGAAACTACCTCATCCAGGGAAACAGCCCTGC
TACACTACCACTACCTGTAAGATAGAAGGAGGGCACTTCACTCACCTCACTCACTAGTAAGCGCTTTCAACTCTCCCTTGAATCCGTTCACCTGTCTTTA
GGCACTCAAAAGGCATAATCAAGCATATAAGATCTAAAAGGCGGATCAAAAATGGAACTTCCAGAGGCTGATAGAGAATACGTTATTTTTAACTTTAAGC
CAATCAATGTAGGATCCGAAAAATTTCTAGAGAACAATGGCCTGTGCCTTCGTTTCACTCGTATCCATGGCAAGTCCCTGATTCACTTCTCACGCCCAAG
GAAAACAGGGAATACAGTTATATTCGACTTTCGGTGGGGAGACCGTAGACTGCATTGAAAGCGTAACTGCGGGAAGAAGGAAAGAAAGCTCCTAGCTATA
GAGTTATGCTCCTAACGTTACATAGACTTATGCTCTGAGCCCACCTACCTTCTTTATTGGCTTACCGAGCTCGAGTACACCCGCTGCCTACATTTATTCT
CTTTGCCAGTTCAGTGCACTTTGAAAAAAGAAGCGAAAGAAACCCCTTGGTGTTGAGCACTACTGAAAAAAGCTATTAAACAAGAGGTTAGGGCTATGCT
GTCACTTTCCCTTTCCATAGTTTGTTAATCGAAGACTAATAAATTTAATACTCTTTACAGCTTCTTGTGTTGAAAGAGTCACTACTTTTTCAAACTCTTC
TTTTCCGCTCAGCTACTCCAGTCTTCTTTTGGAGTATATGGACAGGTAGTTTGAGAGTAAATTTCTTGTTCCAGTGAATCAAACCTATTCTTTTTTTTCT
GCTTTACGGGCTTGACTTCTTTCTTCCATTCCACATAGGCTAGCTTCCTTGCCTCCCTTTCTCAAAGGCTAAAGACATCACTGAAAAAAAAAACTCATTT
CACCTACCTACTCTTAAATAAGGACCCAAAATCCACTTTTTCATATATCAACTTGGTCATAGAAACCGTTTTTCTTATTGAAGGGAATGATTTCCGTTAC
AGTGATTTCAGAAACCACTATCTAGCTCGTACATTCAAAAAAAGGTGAAAGGCATTATCAACTCAACAGTCAAAAGAAAGAAGAGGAAATAGATATAGGA
AGGTCCAAGGCA