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Detailed information on CNT30713027


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONMTRT002184, E-value = 4e-144

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30374334Malus domestica goldenArabidopsis thaliana31.9416.4594.681127forward
CNT30501326Malus domestica goldenCoffea canephora48.9916.3691.091729forward
CNT3021423Malus domestica goldenCitrullus lanatus3.6362.7589.06128forward
CNT30438754Malus domestica goldenAegilops tauschii5.8798.5787.44207reverse complement
CNT30688804Malus domestica goldenTriticum urartu22.7821.7189.8804forward
CNT30366947Malus domestica goldenSorghum bicolor8.1320.188.5287forward
CNT30328854Malus domestica goldenAsparagus officinalis11.0846.2788.75391forward
CNT30102192Malus domestica goldenOryza rufipogon24.1437.2190.38852forward

Expression of CNT30713027

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MLWPPPTYGLYATTTVCDVSASNWFDLSQLS*

>peptide 2 (38 aa)
MPSLTLPFEGSKINVNTWCQQSFFGIILNGSILPSRLF*

>peptide 3 (35 aa)
MERESDSIALTSCLIAFFSSAQHQGVSFASFFKVH*

>peptide 4 (62 aa)
MCLSGSVLLSWVGRVRPEMLCLHTRLPLFPKASRGLLYDDGRPPVGGLLHKAPAEEKLYPSE*

>peptide 5 (51 aa)
MLTHKTTPLPESFAGTTLRRRTTARRGFTAQGPCRGKALSQRIEDAQLRTT*

Sequence

>CNT30713027
GCCTTGGACCTTCCTATATCTATTTCCTCTTCTTTCTTTTGACTGTTGAGTTGATAATGCCTTTCACCTTTTTTTGAATGTACGAGCTAGATAGTGGTTT
CTGAAATCACTGTAACGGAAATCATTCCCTTCAATAAGAAAAACGGTTTCTATGACCAAGTTGATATATGAAAAAGTGGATTTTGGGTCCTTATTTAAGA
GTAGGTAGGTGAAATGAGTTTTTTTTTTCAGTGATGTCTTTAGCCTTTGAGAAAGGGAGGCAAGGAAGCTAGCCTATGTGGAATGGAAGAAAGAAGTCAA
GCCCGTAAAGCAGAAAAAAAAGAATAGGTTTGATTCACTGGAACAAGAAATTTACTCTCAAACTACCTGTCCATATACTCCAAAAGAAGACTGGAGTAGC
TGAGCGGAAAAGAAGAGTTTGAAAAAGTAGTGACTCTTTCAACACAAGAAGCTGTAAAGAGTATTAAATTTATTAGTCTTCGATTAACAAACTATGGAAA
GGGAAAGTGACAGCATAGCCCTAACCTCTTGTTTAATAGCTTTTTTCAGTAGTGCTCAACACCAAGGGGTTTCTTTCGCTTCTTTTTTCAAAGTGCACTG
AACTGGCAAAGAGAATAAATGTAGGCAGCGGGTGTACTCGAGCTCGGTAAGCCAATAAAGAAGGTAGGTGGGCTCAGAGCATAAGTCTATGTAACGTTAG
GAGCATAACTCTATAGCTAGGAGCTTTCTTTCCTTCTTCCCGCAGTTACGCTTTCAATGCAGTCTACGGTCTCCCCACCGAAAGTCGAATATAACTGTAT
TCCCTGTTTTCCTTGGGCGTGAGAAGTGAATCAGGGACTTGCCATGGATACGAGTGAAACGAAGGCACAGGCCATTGTTCTCTAGAAATTTTTCGGATCC
TACATTGATTGGCTTAAAGTTAAAAATAACGTATTCTCTATCAGCCTCTGGAAGTTCCATTTTTGATCCGCCTTTTAGATCTTATATGCTTGATTATGCC
TTTTGAGTGCCTAAAGACAGGTGAACGGATTCAAGGGAGAGTTGAAAGCGCTTACTAGTGAGTGAGGTGAGTGAAGTGCCCTCCTTCTATCTTACAGGTA
GTGGTAGTGTAGCAGGGCTGTTTCCCTGGATGAGGTAGTTTCCGCAGGTTATATTCTATTACGCAGCCACCCACCTATTCGTGATAGGTGAACGAGTCGC
CTAGGTGAAATACTTCTAAATGCTCTTTCATAGAGGACCCTGGCTTCCATTTCTCTATACGTAAGGTATACCCCTGTAACAGGATACTATGGTACACTGC
GCAAATTCGTCGACATCCGGCATCTCAGTTTGTACCTTTTAGAAGGGATTACAGTCGCTAATGGGCTCGTTGGGAAGAAAGATGGAGTGCGGCCTGTAGA
GCACATGTAACGCACAGTCGGGTTGCTCGCGCAGCGGATCTCTCTCTCTCTCTATCTAAAGATATCTAAAGAGAGATGTGAAAGTAATAACCTTATGTTA
TGGCCGCCCCCGACTTACGGCCTTTACGCTACTACTACTGTGTGTGATGTGAGCGCTTCAAATTGGTTTGATCTTTCCCAATTATCCTAGCCGGAACTTG
TACGCAGCACTTATACAGAGGCGCATGCATAAAGGTTTGGAACTCTTTTCTTATCTGAATCTTAAGGACATGACCCTACCCTATTAACCTTATGCCGAGC
TTAACCCTGCCCTTTGAAGGGAGCAAAATAAATGTCAACACCTGGTGCCAACAGTCTTTCTTCGGAATTATACTGAACGGGTCGATCCTCCCCTCCCGTT
TGTTTTAGCAACTTATCCTAAGGTCTCCGCACTAAGAGCTCCCCGGCGACGACAGAGGAACCAACCCGCATGCCGTGGCGGGGCGGCTTTTTTGTTTCAC
AATAAGACCTGGACGATTATCCCTACCCTCGGTAGCTTACGAGTTTACGTCCATCCCCGGTCGGATACAGTTTCCTTTCGATTTCTCCCTTGTAGCCGTT
ACCCGAATTCGCGCAAATGTGTCCGCACCCACCAAACTGACTTGACGAGGAATCCATTCTCGTGAACAAACACAACCCCTACACACACCTAGGAGCACCC
TTTCCTGCATATCCATACAAGACCCGAGTAGGCGGGTCGAGGTCCTACGAGGTACCCACTACTCGGAGTACCCTCCCAAAAGGAAAAATATGTGTCTGTC
AGGTTCGGTTCTTCTTAGTTGGGTTGGGCGGGTTCGACCAGAAATGCTATGCTTACACACAAGACTACCCCTCTTCCCGAAAGCTTCGCGGGGACTACTT
TACGACGACGGACGACCGCCCGTAGGGGGTTTACTGCACAAGGCCCCTGCAGAGGAAAAGCTTTATCCCAGCGAATAGAAGATGCTCAGCTCCGCACAAC
ATAGGGATTAGCACACTTTCGGGAAGAACATAGAATAGTAAAGGATCCAGCATGCGAAACACGGCGATCATTAGAAATTCACGAATTAGAGATGCTGTAA
TATACTCTTTCCCATAACTTTCTCATACCAGACCAACCCACTGAAATGCAAATAGGGATCAGAAATGTGGTCAATATCACGAAGAATAAAGAGATACCGT
CTATACCCAAATAAAAATTGATGTTTTCATAAGGAAGCCATCGAAGGCTTTCCACAAATTGAGATTTGGCCGTAGAAGGATCAAATTGTATCCGAGGAAC
AGGGGGATACAAAAAAGTAATAAGAGAGGCACACACAGACCAATTAATCGTATCGGTCGTATTCTTGAATTTGGAATGAAAAGAGGAGTAATGCTTCCTA
GCACGGGACATAGAATAAGACCACTTAGATCAGAATAGCATTCACAGAAATGTTCTAACATAGAGTTAAATCGAACATTTAAGAGATTAGTTGACAACAG
TAAAAAGATGGGCGCCTAATTCCAATACAATAGGGGTCTATCGGTGCAAGTCAGCTGAACACCATGATTGATGAGTAGGTAGGTGGGTTAGGTGCACCTC
TCGCCCGGTGGGAAGTAATGAGGCTAGTCCCCCCCTGAATGAAGAAGTAGTGGGGCCCCCTTCCCGCATATGTGCTTTTAATTTAGATTATTTCCATCCA
TTTATTTATTTATTTATCCAATGGAGAATCTTTCAATCAAAATAAGAGAACAAAGAAACCCCTCAAAAATTAAAGTTAGATAAAGAAGTTTCCGTAAGAA
CTAGCGCTAGGCTTCTTCCCCCCTTTCTACTTTTCCTCTCTCCCTTTGTTTGTGCTTCTACCCGGGCTTTTCATTCTGTTTTATAGAGACCCGAGGAAAT
AAAAAAGAATTTGTAGAAGGCTGAGGCGCGCTTTCCCCGACGTACAGAAACAAAAATCCAGGATGACGGCTTTCAAAAAACGAGTAAGGGACGGGGAGGC
CCTCGAAACCAAACGAGACTAAAAGGAACATGGGAATTAGCACCATTCCTATGATTTGTCTCGAAAAGCCAACGAGCAGCCCTCTCTCTATCTCGGTCTC
GATTTAGCATCATATATCAATCTGGAGAA