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Detailed information on CNT30712908


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30406248Glycine maxBeta vulgaris13.0542.0692.45106forward
CNT30201828Glycine maxPisum sativum13.0520.4692.45106forward

Expression of CNT30712908

Peptides detected in this lncRNA

>peptide 1 (36 aa)
MDRINAHVKNESSYTEKKFSRGSSKATKACLPSTPE*

>peptide 2 (54 aa)
MAEFWLSTLFHRPPLITLWFRDIIGIINILSEILVHEEQHRISWHELFMINSCV*

>peptide 3 (47 aa)
KFVGRIMFGFIERNYAMTAPWATMAWIYGRILAFHSVPPSTIDNTMV*

Sequence

>CNT30712908
TGAAATTCGTAGGAAGGATAATGTTTGGCTTTATTGAGAGAAATTATGCTATGACAGCACCATGGGCCACAATGGCGTGGATATATGGCAGAATTTTGGC
TTTCCACTCTGTTCCACCGTCCACCATTGATAACACTATGGTTTAGAGACATTATAGGAATCATAAACATCTTGTCTGAGATTTTGGTGCATGAAGAACA
ACATCGGATTAGTTGGCATGAGTTATTCATGATAAATAGTTGTGTTTAACCTTGAGTTCATTCTAGCTACATCTTGCTTGCTTTACCTGTTATTGCGATA
AAATGTGAGCAGCTACATTATTGTGTCTATTTAGAAACTTTGCTAACTCATTCAATATGCAAGAATCATGATTAGGAAGTTAAGATATGATTATCATATG
AGTATTGAAATAGGTTGAATGTGAATTGTATACTTGGATGCATATCTATTAATACTAGTGTTAGATGTCAAGTTAAACACATTGTGGAGTTGTCATTCCG
AATTCAGAAAAAAATAGCTCTAATTTGTTTGATTTGATATTTTGTAGACGTGGTGAAATCCTAATGATGTAAACATCTATTATTTTGCGGTATGTCATCC
AAGTTGTGAAACTTGTTGATGGACAGAATAAATGCACATGTAAAAAATGAATCGAGTTATACGGAAAAGAAGTTTTCAAGGGGGAGTAGTAAGGCCACAA
AAGCCTGCCTGCCATCCACACCAGAATAAATAAAGTTTTCCGAAAAAACCTGATAATGGAGGAAGACCTCCTAAGGATAAGAGACATAGGATTAAAGAGA
GAGCCAAATAAG