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Detailed information on CNT30712762


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CH33|UBQ11_ARATH, E-value = 2e-102

BLAST vs NONCODE:
NONTPRT002153, E-value = 5e-54

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30127456Glycine maxCorymbia citriodora52.1356.9390.27452forward
CNT30120625Glycine maxCitrus clementina52.641.7686.84456forward

Expression of CNT30712762

Peptides detected in this lncRNA

>peptide 1 (52 aa)
MRRCWSGGIPSLSWILALTLSMVSELSTSRVMVLPVSVLTKICMPPRRRRTR*

>peptide 2 (51 aa)
MRRCWSGGIPSLSWILALTLSMVSELSTSRVMVLPVRVLTKICICRVNNHR*

>peptide 3 (34 aa)
KDDHHPSHNSSLFFLHDKHGRPHKSNKKSILSPL*

>peptide 4 (31 aa)
RRMITILHTTHPCFSFMTSMEDHTNRIKNPY*

Sequence

>CNT30712762
CGAAGGATGATCACCATCCTTCACACAACTCATCCCTGTTTTTCCTTCATGACAAGCATGGAAGACCACACAAATCGAATAAAAAATCCATATTAAGTCC
CCTCTAGCCAATTCAGAACAAATTAAAACAACACGATATGACAATTAATCATTTCATATTTCACACATTCATAACAAACGTAGGTGGGATATTAGAGTAC
TATTATTAATGGGACACAATTGAGTTCAACACAAACCGAACTTATTTTCAAGGGACATTATTACAGACCCATTAAACATCAAAGTTCTTCAAATGTTTTG
GGAACACATCCAACATTACACAACGAGCTTAAAACCCCCCACGGAGACGGAGGACAAGGTGAAGGGTTGATTCCTTCTGGATGTTGTAGTCGGCGAGGGT
GCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATGAGACGTTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTGGCCTTGACGTTATCGATGGTG
TCGGAGCTTTCAACCTCTAGGGTTATGGTCTTGCCGGTGAGTGTCTTAACGAAGATCTGCATGCCACCACGGAGACGGAGGACGAGGTGAAGAGTACTCT
CCTTCTGAATGTTGTAGTCAGCAAGGGTACGGCCGTCCTCAAGTTGCTTTCCGGCGAAAATGAGACGTTGCTGGTCCGGGGGGATTCCTTCCTTGTCCTG
GATCTTGGCCTTGACGTTGTCGATGGTGTCAGAGCTTTCCACCTCAAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCATCTGTCGAGTC
AACAATCACAGATAAATCAGAATCAAAATCCATTACGTAATCTTAAGTACGGATCTGAAGCAATCTC