Detailed information on CNT30712704


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9XF89|CB5_ARATH, E-value = 3e-50

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30317005Glycine maxCorylus avellana28.5737.1490.38104forward
CNT30630708Glycine maxVigna unguiculata69.7898.8393.7254forward
CNT30503251Glycine maxNicotiana attenuata60.9925.5281.53222forward
CNT3061832Glycine maxArabidopsis lyrata18.1321.592.4266forward
CNT30216944Glycine maxKalanchoe fedtschenkoi42.0321.7381.7153forward

Expression of CNT30712704

Peptides detected in this lncRNA

>peptide 1 (49 aa)
LEFYIVRCIVHLRVEKNIKMIDLQSWSPLNGASNHSEQVITKRVTEMFC*

Sequence

>CNT30712704
GCCTTGAGTTTTATATAGTAAGATGTATTGTACATTTAAGAGTGGAGAAGAACATAAAGATGATTGATTTACAGAGTTGGAGCCCTCTCAACGGAGCCAG
CAATCACAGTGAGCAGGTTATTACCAAAAGGGTCACTGAGATGTTTTGCTAAGTTCTCAACTGGACCTTCTCCAGTGACATAAGCTTGGAAGTAGAAACC
AAGCATTGCAAACATTGCAAGCCTACCATTCTTAATTTCCTTCACCTTTAGAAGTGCAGCTTGGTCTGGATCCTTTGCTAGGCCCAATGGGTCAAATGGA
CCACCTGGATGAAGCTTGAATGATGAATCCAGCAGCACCAAGCATTGCCCATCTGGCATGAATC