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Detailed information on CNT30712684


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30221496Glycine maxHordeum vulgare3.8225.8790.3852forward

Expression of CNT30712684

Peptides detected in this lncRNA

>peptide 1 (48 aa)
MRRVASPPSSTMRLGPLLRPNRGHTRCTTSTLGGSPSSRQRRQHCHKQ*

>peptide 2 (46 aa)
MVYALRKKERKKERKKESGVVRKGSGVVEDEDETKTTECDILSEAS*

>peptide 3 (32 aa)
MKQDTCYVCNQRGHWSWYCPSSKSPKQDSSTP*

Sequence

>CNT30712684
GCAAACCAGACGTAAACATGGCTCAGGGCTTCTCCTTCAACATCTGAAGTTGATATTCCCACAAACTGCTCCCATTACCTTGTGAAACGAATGAAACAAG
ATACCTGCTACGTTTGTAACCAACGAGGACATTGGTCCTGGTACTGTCCTTCTTCCAAGTCACCCAAGCAAGATTCAAGTACCCCCTGAAACTGAAATTC
CAGCAGCAACACTGTGTTAATGCATCTTGTTCGGCATCTTATGTTATATGTATAATGCTTGTTTCATGGCTTCCTGTTCTCATCCTAATTCAAATCTACT
TATTTAACTAAGGAAATCTGCTTAGTTAAGCCTTTTGCTCTCTGTGGAGACAAAAGAATAATGTTTAATAGTTTGAATATGCTTTTATTTTTTCTAAAAT
GAGTTTCATTTTTTGTCTTTATAATTTTTTTTCTTTGATTTCTATCTCTCGAAAAGTTTAAATCATTGTTTTTTTCTGTATTGTTATGTCACAATTGTTA
ACTATTTATGTGTTTAACACTAGGTCATGTAATAATTTCACGTGACACCCGCTAGTGTTTGTGATATCATGTTAACATGAGGAGGGTAGCGTCACCACCG
TCATCGACGATGAGGTTGGGTCCTTTGCTGAGGCCCAATCGAGGGCACACTCGGTGCACCACCAGTACTCTTGGAGGGTCTCCCTCTTCCAGGCAAAGAC
GACAACACTGTCACAAGCAGTAGCGGCGACGTCGTGGTCCTAGGTGGAGAAGATGTTGCAGGAGCACCGACGGACTTCGGCCTAGGAAAGGTCATTGACC
TTGTACTCGAGACCACTTGTGTGGTTTTCTCCACCAACAAAGCCATGGTTTACGCGCTGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAAAGAGAGTGG
AGTGGTGAGGAAAGGCTCTGGAGTCGTGGAAGACGAAGACGAAACGAAAACGACAGAATGTGATATTTTGAGTGAGGCTAGCTAGGGCAGAAATAAAAAG
GGGGTGTATACACTAATTTTAAAAATGGGTATAGAAAGACCGTCTTTGAACACTCTATTTTTAAGACGTTTTTGATAAAGTCGTCATAGTTCATTTCTTG
TTATTTATAAAATTGCCACTGCTGAGATTCTAAGACGGTTTTATGATAATCGCCTTAAAAAGTGTGTCTTAAAAAATCATTTTTTTTAGTAGTGAGTTGT
CATTGTAATTTTATTATTAGTGACAAAAAAATATTTGTCACAAAAGACTTGTCACTAATACTTATATATTTTACTTTGATATTTTAAAATTGTCACTAAT
CCACATTTTAGTCAAGTAGTCAACATTGTAAGAACCAAACTAAACAACTAAGCCACCTTTC