Detailed information on CNT30712616


BLAST search results

BLAST vs Swiss-Prot:
sp|A9P822|METK1_POPTR, E-value = 1e-152

BLAST vs NONCODE:
NONPOPT000585, E-value = 1e-48

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30672441Glycine maxSetaria viridis23.4924.6588.48191forward
CNT30520816Glycine maxSetaria italica33.4631.4884.93272forward
CNT30641080Glycine maxNymphaea colorata73.867.0481.83600forward
CNT30373104Glycine maxArabidopsis thaliana34.9333.8584.51284forward
CNT3021108Glycine maxCitrullus lanatus37.8818.7186.69308forward
CNT30381460Glycine maxManihot esculenta44.439.2885.6361forward
CNT30628634Glycine maxVigna unguiculata46.4952.592.86378forward
CNT30292894Glycine maxTriticum aestivum19.0727.0587.74155forward
CNT30225924Glycine maxHordeum vulgare19.0727.5384.52155forward
CNT30389985Glycine maxTriticum turgidum30.524.3986.29248forward
CNT30172560Glycine maxTrifolium pratense78.1193.2590.08635forward
CNT30146819Glycine maxMedicago truncatula43.346.8788.64352forward
CNT30441436Glycine maxAegilops tauschii31.3750.381.96255forward
CNT30471290Glycine maxSaccharum spontaneum29.5226.7386.67240forward
CNT30624603Glycine maxDaucus carota30.537.5884.68248forward
CNT30681758Glycine maxTriticum urartu19.0722.7387.74155forward
CNT30349162Glycine maxEragrostis tef39.3635.1385.94320forward
CNT30620815Glycine maxCajanus cajan60.2767.0382.24490forward
CNT30597069Glycine maxOryza meridionalis27.811.2986.28226forward
CNT3022562Glycine maxPopulus trichocarpa46.2524.0485.64376forward
CNT30113329Glycine maxFicus carica34.5626.0984.34281forward
CNT30725315Glycine maxLupinus angustifolius36.4129.4287.16296forward

Expression of CNT30712616

Peptides detected in this lncRNA

>peptide 1 (63 aa)
MTKRPEGLRWKMVFSSRYFSGMTGLITCSLRSAAIWSLLTVSSCWVEIRTVWTRTGTMAPLSL*

>peptide 2 (73 aa)
MSTPPTIGINDDLSSSETSITMRATNDKTARRVKVEDGLLIQVLLRNDRLDNMLFKVSSNLVIAHSLIMLGGN*

>peptide 3 (30 aa)
DIRPMNEVVVVMEHANYSSTPSKTSIEGSD*

>peptide 4 (42 aa)
MATPLKVQVNGDHSRSEVEILLHNLKNLLVRNLPSSISVHKH*

Sequence

>CNT30712616
GACATTAGACCTATGAATGAAGTAGTAGTAGTCATGGAACACGCAAATTATTCATCCACACCTAGCAAGACATCCATTGAAGGGAGTGATTAACTTCACA
ACAATCTTAAGCTTGAGGCTTCTCAGACTTGAGTGGCTTCACAACTTCCCAGGTGAAGTCAGGGTCATCCCTTCCAAAGTGTCCATAAGCAGCTGTCTTG
AGGAACCTATGGCCACCCCTCTTAAGGTCCAAGTTAATGGTGATCATTCCAGGTCTGAAGTCGAAATTCTCCTTCACAATTTGAAGAATCTCCTTGTCAG
GAATCTTCCCAGTTCCATAAGTGTCCACAAACACTGACAAGGGCTCAGGGACACCAATGGCATAGGAAACTTGGACAATGCACCTTCTGGCAAGGCCATT
TGCCACAACACTCTTTGCAGCCTGCCTCACGATATAGGCACCTCCACCATGAGCACCCCACCCACCATAGGTATCAATGATGATCTTTCTTCCAGTGAGA
CCAGCATCACCATGAGGGCCACCAATGACAAAACGGCCAGAAGGGTTAAGGTGGAAGATGGTCTTCTCATCCAGGTACTTCTCAGGAATGACAGGCTTGA
TAACATGCTCTTTAAGGTCAGCAGCAATTTGGTCATTGCTCACAGTCTCATCATGTTGGGTGGAAATTAGGACAGTGTGGACACGAACTGGAACCATGGC
ACCATTGTCATTGTAGTACTCAACAGTTACTTGTGTCTTGCCATCTGGCCTCAGCCAAGCACAGGTACCATTTTTCCTAACCTCGGTGAGGCGAGCACCG
AGTTTGGTTGCAA