Detailed information on CNT30712585


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9FF53|PIP24_ARATH, E-value = 3e-27

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3044723Glycine maxPrunus dulcis38.039.7586.5289forward
CNT30636643Glycine maxCapsicum annuum21.3710.599250forward
CNT30190473Glycine maxSecale cereale22.226.8990.3852forward
CNT30289867Glycine maxTriticum aestivum22.2211.390.3852forward
CNT30225926Glycine maxHordeum vulgare22.227.6690.3852forward
CNT30569510Glycine maxActinidia chinensis19.2321.6391.1145forward
CNT30592144Glycine maxMusa acuminata22.2222.6192.3152forward
CNT3084566Glycine maxVigna radiata60.2623.9490.78141forward
CNT30437070Glycine maxAegilops tauschii22.2210.5388.4652forward
CNT30599410Glycine maxFraxinus excelsior25.649.059060forward
CNT30139319Glycine maxLolium perenne22.224.4492.3152forward
CNT30653715Glycine maxRosa chinensis27.7811.1589.2365forward
CNT30354871Glycine maxLactuca sativa26.9219.2790.4863forward
CNT30704435Glycine maxPrunus avium38.0313.4685.3989forward
CNT3024289Glycine maxPopulus trichocarpa33.7616.1284.8179forward
CNT3035626Glycine maxCucumis melo26.511.0787.162forward
CNT30331328Glycine maxDioscorea rotundata22.2210.1494.2352forward
CNT30113851Glycine maxFicus carica22.2218.7790.3852forward
CNT30724885Glycine maxLupinus angustifolius32.918.5790.9177forward

Expression of CNT30712585

Peptides detected in this lncRNA

>peptide 1 (76 aa)
GNMGVSCYSLGIGSREDGVDKNKGANNLSAQTGSFAVTISEHVHATFVPVVVALLQRQKSCLQRPKRCRGRRRRCRA

Sequence

>CNT30712585
ACGGGAACATGGGAGTCTCTTGCTACTCTCTTGGGATCGGTAGCAGAGAAGACGGTGTAGACAAGAATAAAGGTGCCAATAATCTCAGCGCCCAAACCGG
TTCCTTTGCTGTAACCATCAGCGAGCATGTTCACGCCACCTTTGTACCTGTTGTAGTAGCTCTTCTGCAAAGACAAAAATCATGCCTCCAAAGGCCCAAG
CGATGCCGAGGACGCCGACGCCGCTGCAGGGCTC