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Detailed information on CNT30712572


BLAST search results

BLAST vs Swiss-Prot:
sp|P00865|RBS1_SOYBN, E-value = 9e-55

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30727196Glycine maxCorchorus capsularis28.5512.1584.49187forward
CNT30545373Glycine maxBrassica napus30.2332.4680.81198forward
CNT3038903Glycine maxCucumis melo30.6926.5584.08201forward

Expression of CNT30712572

Peptides detected in this lncRNA

>peptide 1 (72 aa)
MSLLVFLVGKPAMDLRPVNGATMPAPARLTVVTAGEEIIEEAICFSFLVLNYLFFCCQISKLLLKLTIYNSVI

Sequence

>CNT30712572
TGGGTTATTGAAGTTATTTTGAAACAAAGCAACACAACACAATAGCTTATTCATTAGTTCTCATCCATTAATTTCCATTGAAGTCCGAAAACAGAAACCA
AAAATACAGGATGATGAAATCTCAAAAAGCAAAAACAAATGGGAATGTAGTTTAAGTACAAACAAACAAAGTGGGGTGGCGGCTACAAATGCTTTGCAAA
TTTTTCACACTTAGAAGCCTGGGGGCTTGTAGGCGATGAAGCTGATGCACTGCACTTGGCGAACGTTGTCGAATCCGATGATACGGATGAAGCCGTTGGG
GTATGCAGTCTTAGCCTCTTGAAGCTCCTTCAACACCTGAGAAGCATCAGTGCAACCAAACATAGGCAGCTTCCACATGGTCCAGTAGCGTCCATCGTAT
TCTACTTCCTTTGCCAATTGTGCATCATCAAGGTAATGTCATTGTTGGTCTTCCTGGTGGGGAAGCCAGCCATGGACTTGAGGCCAGTGAATGGAGCAAC
CATGCCGGCACCGGCACGGTTGACAGTGGTAACAGCTGGGGAAGAGATCATTGAGGAAGCCATTTGCTTCTCCTTCTTAGTTCTCAACTACTTGTTCTTC
TGCTGCCAGATATCCAAGCTTCTGCTCAAACTTACTATATATAATAGTGTGATTT