Detailed information on CNT30712551


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9FY14|TIP1_MEDTR, E-value = 8e-51

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30519799Glycine maxSetaria italica21.8213.9891.6784forward
CNT30547910Glycine maxIpomoea triloba39.7423.8786.93153forward
CNT30628532Glycine maxVigna unguiculata57.1454.3290.45220forward

Expression of CNT30712551

Peptides detected in this lncRNA

>peptide 1 (60 aa)
MPRRKVTAGLTWPPEMLAPTETATKRANAWAMEAMPEPEPANTKMKVEMNSAKAAFNVSG*

Sequence

>CNT30712551
AATAACGGTCTTACGGAGGCGGTGACGAAGGCCAGGAGGAGGGAGGCGACGATGGAGCCGAGGAGCTGGGCGATGACGTAGACGATGCCGCGGAGGAAGG
TGACGGCGGGGTTGACGTGGCCGCCGGAGATGTTGGCGCCGACGGAGACGGCGACGAAGAGGGCGAATGCATGGGCGATGGAGGCGATGCCGGAGCCTGA
GCCGGCGAACACGAAGATGAAGGTTGAGATGAACTCAGCCAAAGCCGCCTTCAACGTGTCGGGGTGAGTCGCCTCTTCAGGCCTTCCGACGGCGATGTTT
CTGATCGGCATCTTCTTCAATTGACGCTGACGATTATGATGAGATCAAGTGAACACCGATCACTCACTGAAATCACTCTCTGTTT