Detailed information on CNT30712450


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30673747Glycine maxSetaria viridis72.5468.6788.35206forward
CNT30521637Glycine maxSetaria italica59.5133.2791.72169forward
CNT30617447Glycine maxSesamum indicum81.6939.1990.52232reverse complement
CNT30178555Glycine maxSecale cereale96.4832.5487.96274forward
CNT30225509Glycine maxHordeum vulgare96.4854.1587.96274forward
CNT30562726Glycine maxActinidia chinensis7553.6589.67213forward
CNT30466470Glycine maxSaccharum spontaneum96.4860.7587.96274reverse complement
CNT30646978Glycine maxRosa chinensis93.3184.6691.32265forward
CNT30203596Glycine maxHelianthus annuus95.0731.3291.85270forward
CNT30713553Glycine maxMalus domestica golden95.4240.2192.25271forward
CNT30627950Glycine maxDaucus carota88.3858.3792.43251forward
CNT30719996Glycine maxTriticum spelta96.4843.0889.05274reverse complement
CNT30705531Glycine maxPrunus avium35.2135.7194100reverse complement
CNT30604859Glycine maxOryza punctata50.769.5792.36144reverse complement

Expression of CNT30712450

Peptides detected in this lncRNA

>peptide 1 (52 aa)
TCQAEGRSQWTTGEYSCTTLCWSRGTEEARLAERWLSVQGCKVPLLFQGNKG*

>peptide 2 (30 aa)
LVRPKGVVNGQQVNIPVLPFVGPEGRRRLG*

Sequence

>CNT30712450
ACTTGTCAGGCCGAAGGGCGTAGTCAATGGACAACAGGTGAATATTCCTGTACTACCCTTTGTTGGTCCCGAGGGACGGAGGAGGCTAGGTTAGCCGAAA
GATGGTTATCGGTTCAAGGATGCAAGGTGCCCCTGCTTTTTCAGGGTAATAAGGGATAGAGAAAATGTCTCGAGTCAAAGTTCCAGTATCAGGCGCTACA
GCGCTGAAGTAATCCATACCATACTTCCAGGAAAAGCTCGAACGACCTTCAACAAATGGGTACCTGTACCCGAAATCGAAAAAT