Detailed information on CNT30712408


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9MTN7|PSAB_OENEH, E-value = 3e-42

BLAST vs NONCODE:
NONGMAT001041, E-value = 7e-109

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30201934Glycine maxPisum sativum100.3616.9590.61277forward
CNT30194074Glycine maxSecale cereale94.5727.1985.44261forward
CNT30219816Glycine maxHordeum vulgare94.5713.184.29261forward
CNT301761Glycine maxZea mays91.34.4585.32252forward
CNT30682212Glycine maxTriticum urartu94.577.9285.82261forward
CNT30368556Glycine maxSorghum bicolor77.943.2684.65215forward
CNT30430934Glycine maxPapaver somniferum97.14.186.57268forward
CNT3054267Glycine maxAmborella trichopoda92.3934.3784.31255forward
CNT30103614Glycine maxOryza rufipogon94.5737.6685.06261forward
CNT30585620Glycine maxEchinochloa crusgalli91.34.9185.32252forward
CNT30117327Glycine maxOryza nivara40.9452.3189.38113forward

Expression of CNT30712408

Peptides detected in this lncRNA

>peptide 1 (32 aa)
MLQNSLADLHETNSRKSTEKLLLIARNEKQKYS

Sequence

>CNT30712408
AAGATCCCTATTAGTACGTAAACCGATTGTATACCACCACTGATAAACACCAAAATAGGCTATATTAGCTGGGCCTAGAGTACCTCCTCGAGTAAAAGCT
TCTACAGCCGGTTGTCCAAAATGAGGATCCCAAATTGCATGAGCTATAGGTCTTACATGTAAGGAACCTGTACCCATGCTTCAAAATTCCCTTGCTGATC
TACATGAAACAAATTCCCGGAAATCCACAGAAAAATTATTGCTAATTGCCCGAAATGAGAAGCAAAAATATTCTGA