Detailed information on CNT30712364


BLAST search results

BLAST vs Swiss-Prot:
sp|P36181|HSP80_SOLLC, E-value = 3e-58

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30675852Glycine maxSetaria viridis47.3637.0882.45188forward
CNT30512942Glycine maxJuglans regia10078.387.41397forward
CNT3071729Glycine maxQuercus suber55.6778.9383.71221forward
CNT30402735Glycine maxBeta vulgaris55.4216.1588.18220forward
CNT30526133Glycine maxPhaseolus vulgaris28.215689.29112forward
CNT30631181Glycine maxVigna unguiculata58.6943.887.98233forward
CNT3094731Glycine maxSolanum tuberosum96.2225.4583.77382forward
CNT30566784Glycine maxActinidia chinensis94.9649.6184.62377forward
CNT30145759Glycine maxMedicago truncatula53.455.9484.43212forward
CNT3061941Glycine maxArabidopsis lyrata19.653091.0378forward
CNT30613762Glycine maxArabis alpina94.9694.2585.94377forward
CNT30652959Glycine maxRosa chinensis55.4245.7491.36220forward
CNT30625276Glycine maxDaucus carota60.4517.0785.42240forward
CNT30366950Glycine maxSorghum bicolor51.8924.0781.07206forward
CNT30418103Glycine maxPapaver somniferum93.4595.1388.14371forward
CNT30704690Glycine maxPrunus avium60.4511.8188.75240forward
CNT3022206Glycine maxPopulus trichocarpa91.9467.186.58365forward

Expression of CNT30712364

Peptides detected in this lncRNA

>peptide 1 (35 aa)
SSTSSTLPSSSFFSSSSSSSEISFSVVFSTQREIG*

>peptide 2 (58 aa)
MNSECFLIKSFNRRSSRTSPEVSLVTVNEPPAWDSQTYCSSSLCLEVTMTFSATRYAE*

>peptide 3 (64 aa)
INILHLTLLILLLFLILIVRNLLLGSLLNPKRNWVANELRMLLNQILQPALLKNLTRGIPGDSE*

Sequence

>CNT30712364
TCATCAACATCCTCCACCTTACCCTCCTCATCCTTCTTCTCTTCCTCATCCTCATCGTCAGAAATCTCCTTCTCGGTAGTCTTCTCAACCCAAAGAGAAA
TTGGGTAGCTAATGAACTCAGAATGCTTCTTAATCAAATCCTTCAACCGGCGCTCCTCAAGAACCTCACCAGAGGTATCCCTGGTGACAGTGAATGAACC
TCCAGCTTGGGACTCCCAAACGTACTGCTCATCATCATTGTGCTTGGAGGTAACAATGACCTTTTCGGCAACAAGATATGCAGAGTAGAACCCCACACCA
AACTGTCCAATCATACTAACATCAGCACCAGCAGCCAAGGCTTCCATGAATTCCTTGGTACCAGACCTAGCAATTGTACCCAAGTTGTTTACCAAAT