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Detailed information on CNT30712340


BLAST search results

BLAST vs Swiss-Prot:
sp|P36181|HSP80_SOLLC, E-value = 1e-85

BLAST vs NONCODE:
NONMEST000006, E-value = 3e-91

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30695408Glycine maxOryza sativa35.4850.8781.86204forward
CNT30523385Glycine maxSetaria italica36.3527.4382.3209forward
CNT3019808Glycine maxCitrullus lanatus28.1724.1887.04162forward
CNT30729348Glycine maxCorchorus capsularis21.7413.8184.8125forward
CNT30379140Glycine maxManihot esculenta28.1719.2687.65162forward
CNT30526134Glycine maxPhaseolus vulgaris27.1324.4986.54156forward
CNT30636154Glycine maxCapsicum annuum21.7427.0692125forward
CNT3098657Glycine maxSolanum tuberosum27.1326.6791.67156forward
CNT30187977Glycine maxSecale cereale28.3522.5888.34163forward
CNT30510227Glycine maxSolanum lycopersicum22.7811.1988.55131forward
CNT30554909Glycine maxOryza glaberrima35.1352.4781.19202forward
CNT30145670Glycine maxMedicago truncatula28.1739.888.89162forward
CNT30314068Glycine maxCamelina sativa22.268.4489.06128forward
CNT30606420Glycine maxGossypium raimondii21.9122.0787.3126forward
CNT30204348Glycine maxHelianthus annuus18.2633.0285.71105forward
CNT30688537Glycine maxTriticum urartu12.8732.0391.8974forward
CNT30348495Glycine maxEragrostis tef36.3570.1383.73209forward
CNT30154320Glycine maxPrunus persica43.6568.0282.47251forward
CNT30103468Glycine maxOryza rufipogon35.1338.6281.19202forward
CNT30551470Glycine maxOryza brachyantha23.4831.0387.41135forward

Expression of CNT30712340

Peptides detected in this lncRNA

>peptide 1 (34 aa)
MLLNQILQPALLKEESDLSTPAKNLTRGIPGDSE*

>peptide 2 (48 aa)
LNREVLDSQMLFPVIGKTLVESRILLFCDLLRLPHPNGLLLVHQGPFM*

>peptide 3 (68 aa)
MNSECFLIKSFNRRSSRKRVILVPLPRTSPEVSLVTVNEPPAWDSQTYCSSSLCLEVTMTFSATRYAE*

>peptide 4 (63 aa)
MGFCLFTKDHSCDTSLIFFFFFSSFSFSSSTSSTLPSSSFFSSSSSSSEISFSVVFSTQREIG*

Sequence

>CNT30712340
CTCAACAGAGAAGTGCTTGACAGCCAAATGCTCTTCCCAGTCATTGGTAAGACTCTTGTAGAAAGCAGAATACTCCTCTTTTGTGATCTCCTCAGGCTTC
CTCATCCAAATGGGCTTCTGCTTGTTCACCAAGGACCATTCATGTGACACTTCCTTGATCTTCTTTTTCTTTTTTTCTTCCTTCTCCTTCTCCTCATCAA
CATCCTCCACCTTACCCTCCTCATCCTTCTTCTCTTCCTCATCCTCATCGTCAGAAATCTCCTTCTCGGTAGTCTTCTCAACCCAAAGAGAAATTGGGTA
GCTAATGAACTCAGAATGCTTCTTAATCAAATCCTTCAACCGGCGCTCCTCAAGGAAGAGAGTGATCTTAGTACCCCTGCCAAGAACCTCACCAGAGGTA
TCCCTGGTGACAGTGAATGAACCTCCAGCTTGGGACTCCCAAACGTACTGCTCATCATCATTGTGCTTGGAGGTAACAATGACCTTTTCGGCAACAAGAT
ATGCAGAGTAGAACCCCACACCAAACTGTCCAATCATACTAACATCAGCACCAGCAGCCAAGGCTTCCATGAATT