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Detailed information on CNT30712284


BLAST search results

BLAST vs Swiss-Prot:
sp|Q76H85|H4_SILLA, E-value = 6e-52

BLAST vs NONCODE:
NONGMAT001001, E-value = 6e-163

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30317753Glycine maxCorylus avellana61.4941.5283.39289forward
CNT30549659Glycine maxIpomoea triloba25.9640.1384.43122forward
CNT30703567Glycine maxQuercus lobata33.6231.2985.44158forward
CNT30375418Glycine maxArabidopsis thaliana28.7257.280.74135forward
CNT30617135Glycine maxSesamum indicum36.1716.9584.71170forward
CNT3069058Glycine maxQuercus suber28.7215.4387.41135forward
CNT30198984Glycine maxPisum sativum54.0434.7585.83254forward
CNT3042757Glycine maxPrunus dulcis41.4932.1887.18195forward
CNT3092650Glycine maxSolanum tuberosum22.1327.0883.65104forward
CNT30186872Glycine maxSecale cereale34.2632.2679.5161forward
CNT30221015Glycine maxHordeum vulgare34.2630.5579.5161forward
CNT30565712Glycine maxActinidia chinensis13.1920.7491.9462forward
CNT3086283Glycine maxVigna radiata34.8911.0484.15164forward
CNT30172567Glycine maxTrifolium pratense57.8739.8885.66272forward
CNT30256114Glycine maxAvena sativa34.4731.480.86162forward
CNT3059678Glycine maxArabidopsis lyrata34.8934.181.71164forward
CNT3082467Glycine maxBrassica juncea38.0924.9782.68179forward
CNT30261175Glycine maxBrassica rapa31.731.5783.89149forward
CNT30611328Glycine maxArabis alpina38.7239.9185.16182forward
CNT30211420Glycine maxHelianthus annuus59.1556.0581.29278forward
CNT30687044Glycine maxTriticum urartu32.1314.8280.13151forward
CNT30619612Glycine maxCajanus cajan51.9158.2389.75244forward
CNT30414711Glycine maxPapaver somniferum28.5114.0283.58134forward
CNT3052246Glycine maxAmborella trichopoda51.720.1782.72243forward
CNT3024855Glycine maxPopulus trichocarpa24.0419.2584.96113forward
CNT30325970Glycine maxAsparagus officinalis34.2623.3386.96161forward
CNT30331117Glycine maxDioscorea rotundata32.7716.2679.87154forward
CNT30496126Glycine maxDigitaria exilis34.2623.6881.99161forward
CNT3050826Glycine maxCucumis sativus35.5348.9786.83167forward

Expression of CNT30712284

Peptides detected in this lncRNA

>peptide 1 (68 aa)
NNMPNRNDTPFKFQMKYFLCKPEIRMIHNKPKLKHHANSKEPMSYPATQKRRVKFFSLQNRRGSFPAS*

Sequence

>CNT30712284
AAATAATATGCCTAACAGAAACGATACTCCATTTAAATTTCAAATGAAATATTTTCTATGCAAACCAGAGATTCGTATGATACATAACAAACCTAAACTA
AAACACCACGCAAATTCAAAAGAACCAATGTCTTATCCTGCAACCCAGAAAAGAAGGGTTAAATTCTTTAGCCTCCAAAACCGTAGAGGGTCCTTCCCTG
CCTCTTGAGCGCATAAACCACATCCATGGCAGTCACCGTCTTCCTCCTAGCGTGCTCGGTGTAGGTCACAGCATCTCGAATCACGTTCTCCAAGAAAATC
TTCAGAACCCCCCTGGTTTCCTCGTAGATCAAACCACTGATTCTCTTCACACCACCTCTTCTCGCTAACCTACGAATCGCAGGTTTCGAGATACCTTGAA
TGTTATCTCGAAGAACTTTTCTGTGCCTCTTGGCACCTCCCTTTCCCAAACCCCTTGCCACCTTTCCCCC