Detailed information on CNT30712220


BLAST search results

BLAST vs Swiss-Prot:
sp|Q39654|PSAL_CUCSA, E-value = 2e-25

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30639966Glycine maxNymphaea colorata21.95.5386.7583forward
CNT30726869Glycine maxLupinus angustifolius55.4115.4986.19210forward

Expression of CNT30712220

Peptides detected in this lncRNA

>peptide 1 (53 aa)
SSLDVVWKVQDVEEEVGPNNTRNASEEEASGELGPPISSLELIGLLLAARQGQ*

Sequence

>CNT30712220
TTTCTTCACTTGATGTAGTATGGAAGGTCCAAGACGTAGAGGAGGAAGTAGGCCCAAATAACACCCGAAATGCCTCCGAAGAAGAAGCCTCCGGTGAACT
TGGCCCACCCATCAGCAGTTTGGAGCTGATCGGGCTCCTTCTTGCGGCCCGTCAAGGTCAGTGACGGGGCAGTGGATGGGTGGAGTGGTGAAGAGGCAGA
GAGGCCCTTGGGAGCTACAAGAGTTTTAGTGAAGGTGGACTTGAGTTGGCTTGCCATAGGAGAAGCAGCTGCCATGATGATGGCCTTGTGTTGTTGTTAG
TTCCACACAGTGGCTTAAGTGAGGGACCGAACTGGCTAAGTGCAAGATCAAGGTTGTGGCTGTTGAAGGCCCTCTTATC