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Detailed information on CNT30712211


BLAST search results

BLAST vs Swiss-Prot:
sp|P14009|14KD_DAUCA, E-value = 7e-35

BLAST vs NONCODE:
NONGMAT000922, E-value = 3e-175

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30629257Glycine maxVigna unguiculata33.1337.1585.51214forward
CNT30488043Glycine maxOlea europaea15.6324.6383.17101forward

Expression of CNT30712211

Peptides detected in this lncRNA

>peptide 1 (71 aa)
VDLSADESLGNTLSTVVEKQAQLDWDIKVDAQHISFESGAKAHRSFKISKTLNEVAAWGLWWLPKLHVNQT*

>peptide 2 (78 aa)
MRLQHGVFGGFPSCTLIKPNTSAHTPNLMVSLGQLGCFGEGGFGTGGCLGVLGGGLHGTYVELTTVKKRTLRHKRIAR*

Sequence

>CNT30712211
GTTGATTTAAGCGCAGACGAATCCCTTGGGAACACCCTTTCCACAGTAGTTGAGAAGCAAGCTCAACTTGACTGGGACATTAAGGTTGATGCCCAACACA
TTAGCTTTGAGAGCGGTGCAAAGGCACACCGCAGCTTCAAGATCAGCAAGACCCTGAATGAGGTTGCAGCATGGGGTCTTTGGTGGCTTCCCAAGTTGCA
CGTTAATCAAACCTAACACATCAGCACACACACCAAACTTAATGGTGTCTTTGGGGCAACTTGGTTGCTTTGGGGAAGGTGGCTTTGGGACAGGTGGGTG
TTTGGGAGTTTTGGGGGGTGGATTACATGGCACATATGTGGAACTAACCACAGTGAAAAAGAGAACATTGAGACACAAGAGAATTGCACGTTAATCAAAC
CTAACACATCAGCACACACACCAAACTTAACAGTGTCCTTGGGGCAAGAAACTTGCTTTGGGGAAGGTGGCTTTGGGACAGGTGGGTGTTTGGGAGTTTT
GGGGGGTGGGTTGCATGGAACATATGTGGAACTAACCACAGTGAAGAAGAGAACATTGAGACACAAGAGAATTGCACCCTTGGAAGTCATTTCTCACTAT
GGTGTTTTGAAGTTGCTCACTCTTAGAACACTTACTTTGGTTTGGT