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Detailed information on CNT30712184

BLAST search results

BLAST vs Swiss-Prot:
sp|Q6ENB7|YCF68_ORYNI, E-value = 2e-34

BLAST vs NONCODE:
NONMEST001876, E-value = 1e-96

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30533065	Glycine max	Eucalyptus grandis	31.33	24.87	93.09	188	forward
CNT30637537	Glycine max	Capsicum annuum	40.17	40.1	85.06	241	forward
CNT30177674	Glycine max	Secale cereale	21.17	6.26	96.06	127	forward
CNT30714122	Glycine max	Malus domestica golden	37.17	54	93.72	223	forward
CNT30627901	Glycine max	Daucus carota	101.5	52.05	93.27	609	forward
CNT30684661	Glycine max	Triticum urartu	96.83	13.73	91.91	581	forward
CNT30720008	Glycine max	Triticum spelta	21.17	52.26	96.85	127	reverse complement
CNT30362263	Glycine max	Sorghum bicolor	76	52.72	92.11	456	forward
CNT30595932	Glycine max	Oryza meridionalis	83.17	37.55	91.18	499	forward
CNT3057391	Glycine max	Amborella trichopoda	39.83	4.73	85.77	239	forward
CNT30318962	Glycine max	Asparagus officinalis	96.33	27.72	93.77	578	forward
CNT30148380	Glycine max	Brachypodium distachyon	46.5	20.58	93.55	279	forward
CNT30575742	Glycine max	Oryza barthii	74.33	99.55	90.13	446	forward
CNT30726606	Glycine max	Lupinus angustifolius	100.5	51.15	96.68	603	forward

Expression of CNT30712184

Peptides detected in this lncRNA

>peptide 1 (39 aa)
MNSREERSRGGPPRIARIPRVKRKLDLHWISPESPHLSS*

>peptide 2 (39 aa)
MIHISGSGADEHIKLSMWLRALTVQAQRRNYQGRALPLS*

>peptide 3 (33 aa)
MYEFSRREEPWWSPPDRPDPTSEEKVGSTLDLT*

Sequence

>CNT30712184
TTTTTCACGTTCTTCCTTTCGGGAAGGAAGGATTAGTAAAATCCTATTGATTGCAATTTTCTCCAGACCCCCGGGAAAAGCATGAAAAAAGGCTCGAATG
GTACGATCCCACCGTCACCCCAGAATGAAAGGGGCGATCTCGTAGTTCTTGGTCTGTGAAGATACGTTGTTTAGGTGCTCCGTTTTTTTCCATTGAGGCC
AAACCTAAACCTGTGCTCGAGAGATAACTGTCCATATACTGATAAGGGATGTATGAATTCTCGAGAAGAGAGGAGCCGTGGTGGTCCCCCCCGGATCGCC
CGGATCCCACGAGTGAAGAGAAAGTTGGATCTACATTGGATCTCACCTGAATCGCCCCATCTATCCTCCTGAGGATAAGTTTGGTTTCAAACCCCGGTTC
AAACAGGAGAAGTACGCCATGCTAATGTGCCTTGGATGATCCACATCTCAGGGTCAGGCGCCGATGAGCACATTAAACTATCCATGTGGCTGAGAGCCCT
CACAGTCCAGGCACAACGACGCAATTATCAGGGGCGCGCTCTACCACTGAGCTAATAGCCCGTCGTGCGGGCCTCCCGCCGGGGCCCGCTATGCCAAAAG