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Detailed information on CNT30712062


BLAST search results

BLAST vs Swiss-Prot:
sp|P14009|14KD_DAUCA, E-value = 2e-26

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30480474Glycine maxArabidopsis halleri26.4731.0380.56144forward
CNT3039001Glycine maxCucumis melo20.2223.0184.55110forward
CNT30114630Glycine maxEutrema salsugineum19.1233.9981.73104forward

Expression of CNT30712062

Peptides detected in this lncRNA

>peptide 1 (32 aa)
MLIVRKRARKERVLEPILNFLGFFFSLTNGSQI

>peptide 2 (47 aa)
MPWLRARACPAGRGKGKEENVDREEKSKERASFGTHLKLFRVFFFFN*

>peptide 3 (53 aa)
GTCLEQTLRSKLSEIGRLRLMPKMFALRAVQRHTAASRSTRPLRREQQGVTGG*

Sequence

>CNT30712062
GTGGGACTTGCCTTGAGCAAACATTGAGAAGCAAGCTGAGTGAGATAGGAAGGTTGAGGTTGATGCCCAAAATGTTTGCCCTAAGGGCAGTGCAAAGGCA
CACTGCAGCTTCAAGATCAACAAGACCATTGAGGAGGGAGCAACAAGGGGTAACTGGTGGTTGACCTAAAGTCACGTTCAACAACCCGTTTAGCACATTG
GCACACACTCCTAGTTTGAGTGCGTCACGAGGGCAAGAGGTACTTGAGCCACCTGAACCACCCGAGCCACCTGAACCACCAGAACCACCTGAACCACCAG
AGCCACCTGAACCACCAGAGCCTCCTGAACCACCCGAACCACCTGAGCCACCTGAAGGACTTGGCTTAACAGGCTTGTGCTTATTATGCCTTGGCTTAGG
GCTAGGGCATGTCCCGCAGGCAGAGGCAAGGGCAAAGAAGAGAATGTTGATCGTGAGGAAAAGAGCAAGGAAAGAGCGAGTTTTGGAACCCATCTTAAAC
TTTTTAGGGTTTTTTTTTTCTTTAACTAATGGCTCGCAGATTTA