Detailed information on CNT30712033


BLAST search results

BLAST vs Swiss-Prot:
sp|P14009|14KD_DAUCA, E-value = 1e-36

BLAST vs NONCODE:
NONGMAT000922, E-value = 1e-105

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30152896Glycine maxPrunus persica25.2714.0985.22115forward
CNT30174518Glycine maxVigna angularis22.236.8684.16101reverse complement

Expression of CNT30712033

Peptides detected in this lncRNA

>peptide 1 (71 aa)
VDLSADESLGNTLSTVVEKQAQLDWDIKVDAQHISFESGAKAHRSFKISKTLNEVAAWGLWWLPKLHVNQT*

>peptide 2 (51 aa)
MRLQHGVFGGFPSCTLIKPNTSAHTPNLMVALGQVGVWEFWGVDYMAHMWN*

Sequence

>CNT30712033
GTTGATTTAAGCGCAGACGAATCCCTTGGGAACACCCTTTCCACAGTAGTTGAGAAGCAAGCTCAACTTGACTGGGACATTAAGGTTGATGCCCAACACA
TTAGCTTTGAGAGCGGTGCAAAGGCACACCGCAGCTTCAAGATCAGCAAGACCCTGAATGAGGTTGCAGCATGGGGTCTTTGGTGGCTTCCCAAGTTGCA
CGTTAATCAAACCTAACACATCAGCACACACACCAAACTTAATGGTGGCTTTGGGACAGGTGGGTGTTTGGGAGTTTTGGGGGGTGGATTACATGGCACA
TATGTGGAACTAACCACAGTGAAAAAGAGAACATTGAGACACAAGAGAAGTGCAGCCTTGGAAGCCATTTCTCACAAGTTGCTCACTCTTAGAACACTAT
ACCTCTTACTTTGGTTTAGTGTGTGTGAGCTTGGGATTGAGTTGCAGAGAATGAG