Detailed information on CNT30711968


BLAST search results

BLAST vs Swiss-Prot:
sp|P14226|PSBO_PEA, E-value = 1e-131

BLAST vs NONCODE:
NONGMAT000837, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30700663Glycine maxQuercus lobata48.6166.2386.04351forward
CNT30277684Glycine maxChenopodium quinoa60.5348.7780.78437forward
CNT30727933Glycine maxCorchorus capsularis60.9429.4383.64440forward
CNT30379731Glycine maxManihot esculenta60.6639.4683.33438forward
CNT30525147Glycine maxPhaseolus vulgaris47.6556.2193.02344forward
CNT3091587Glycine maxSolanum tuberosum42.883.7481.23309forward
CNT3086112Glycine maxVigna radiata51.9460.8891.73375forward
CNT30508746Glycine maxSolanum lycopersicum44.7439.0183.59323forward
CNT30147296Glycine maxMedicago truncatula64.9682.1484.86469forward
CNT30718209Glycine maxMalus domestica golden59.2831.882.24428forward

Expression of CNT30711968

Peptides detected in this lncRNA

>peptide 1 (54 aa)
WMMRHFYCFPWQVLPHLLFHQQAKQLHCHNLWKHLFPWGPRKSFHGRMGLETPH*

>peptide 2 (29 aa)
LDDEALLLFSLASSSSSPLPPAGKATALS*

>peptide 3 (59 aa)
MSFVFWNSRGAFLATPSAFTVNEVGSRHNFLALYFPGLKANEAEVARANPAILVASTHL*

Sequence

>CNT30711968
CTTGGATGATGAGGCACTTTTATTGTTTTCCTTGGCAAGTTCTTCCTCATCTCCTCTTCCACCAGCAGGCAAAGCAACTGCATTGTCATAACCTGTGGAA
GCACCTCTTCCCTTGGGGTCCAAGAAAGAGCTTCCACGGTAGGATGGGACTAGAAACTCCCCACTAAAGCTATCTGGCTTCCCTGATGCCACCAACTGCT
TGATGGTGAAGAGAAAGGGCACACGTTCGCCTCCCGGTAGCTGAACTGTCACGGCGGCGTAGTCAATGCCATCCTTCTCCTCAAACTTGACAGTGCCATC
AGAAGACACCTCAAAGGGTCCCTCAATCTCATCCAGAGTGTAGGTCAAACGTGTCATGAGCTTTGTGTTTTGGAACTCAAGGGGAGCATTCTTGGCCACA
CCCTCGGCCTTCACTGTGAATGAAGTTGGCTCAAGGCACAACTTCTTGGCATTGTATTTCCCCGGCTTGAAGGCAAATGAGGCAGAGGTGGCAAGGGCGA
ATCCTGCAATTTTGGTAGCATCAACACACTTGTGAGCCAAGTCCTTAAGATCAGCCTGAAGGGAGCATGTGACCTTTTTAGCTCCAACAGGTTCCAAACC
AAAAGCCTTGGAAATGGACTGAGTAGACTTTTGCTGCAAAGTGTTGCTCCTGCTCAACTTGGTGGGTTGCATGAAAGTAGCTGCTGCTTGTAGTGACGCT
GCCATTACCACCAATCTAATGT