Detailed information on CNT30711848


BLAST search results

BLAST vs Swiss-Prot:
sp|P10707|CB2D_SOLLC, E-value = 2e-23

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30512461Glycine maxJuglans regia16.9733.0784.5284forward
CNT30380061Glycine maxManihot esculenta43.2356.7684.11214forward
CNT30544306Glycine maxBrassica napus29.742.1288.44147forward
CNT3077810Glycine maxBrassica juncea29.723.685.03147forward
CNT30210280Glycine maxHelianthus annuus30.9117.4582.35153forward
CNT30479805Glycine maxArabidopsis halleri29.748.3689.12147forward
CNT30321864Glycine maxAsparagus officinalis23.4325.1181.9116forward

Expression of CNT30711848

Peptides detected in this lncRNA

>peptide 1 (65 aa)
MKMNDLESWSSLSRSRNDSEQVVAKRVTEMFCKVLNRTFSSDISLEVETKHGKHSKSSIFNFLHL*

>peptide 2 (78 aa)
MANIASLPFLISFTFSSAAWSGSFASPNGYPHQEADGAGLVAPLRLMGFPSISDMPREAAAVDAAREAMLWNPHKKLR*

Sequence

>CNT30711848
CAAGGAACAAAGCCAAATGCCTTAATATCTCAGTGATATGTATTGTACATTAAGTAAGATTGGAGAAAAACATGAAGATGAATGATTTAGAGAGTTGGAG
CTCTCTCAGCAGATCCAGAAATGACAGTGAGCAAGTTGTTGCCAAAAGGGTCACTGAGATGTTTTGCAAGGTTCTCAACAGGACCTTCTCCAGTGACATA
AGCTTGGAAGTAGAAACCAAGCATGGCAAACATAGCAAGTCTTCCATTTTTAATTTCCTTCACCTTTAGCAGTGCAGCTTGGTCTGGATCATTTGCAAGC
CCCAATGGGTACCCCCATCAAGAAGCAGATGGAGCTGGCCTTGTGGCACCACTGAGGTTGATGGGGTTTCCAAGCATTTCTGACATGCCAAGGGAAGCAG
CAGCAGTGGATGCTGCAAGGGAAGCCATGCTTTGGAATCCTCACAAAAAGCTCAGGTGAATGTGGTGCTGATTCACAAGCCAAGAGGGTGAAGGA