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Detailed information on CNT30711584

BLAST search results

BLAST vs Swiss-Prot:
sp|O23755|EF2_BETVU, E-value = 2e-102

BLAST vs NONCODE:
NONGMAT000778, E-value = 4e-137

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30674834	Glycine max	Setaria viridis	24.72	27.15	87.93	174	forward
CNT30532843	Glycine max	Eucalyptus grandis	31.53	30.33	85.14	222	forward
CNT30316236	Glycine max	Corylus avellana	35.09	53.81	87.04	247	forward
CNT30547574	Glycine max	Ipomoea triloba	24.86	49.3	88	175	forward
CNT30512729	Glycine max	Juglans regia	50	34.21	84.09	352	forward
CNT30373394	Glycine max	Arabidopsis thaliana	35.65	44.66	82.47	251	forward
CNT30276060	Glycine max	Chenopodium quinoa	34.38	38.17	86.78	242	forward
CNT3019597	Glycine max	Citrullus lanatus	34.38	32.35	83.88	242	forward
CNT30379936	Glycine max	Manihot esculenta	36.79	77.54	85.71	259	forward
CNT30405823	Glycine max	Beta vulgaris	17.76	27.78	89.6	125	forward
CNT30488117	Glycine max	Olea europaea	22.87	32.99	85.71	161	forward
CNT3045373	Glycine max	Prunus dulcis	35.51	31.89	85.2	250	forward
CNT30191304	Glycine max	Secale cereale	49.72	26.9	85.43	350	forward
CNT30300473	Glycine max	Triticum aestivum	50	36.36	85.8	352	forward
CNT30224354	Glycine max	Hordeum vulgare	49.29	66.86	83.57	347	forward
CNT30395070	Glycine max	Triticum turgidum	49.72	45.75	82.57	350	forward
CNT30561656	Glycine max	Actinidia chinensis	36.51	18.36	85.6	257	forward
CNT3085191	Glycine max	Vigna radiata	35.94	35.29	90.91	253	forward
CNT30510505	Glycine max	Solanum lycopersicum	43.04	27.9	85.15	303	forward
CNT30552635	Glycine max	Oryza glaberrima	84.66	57.42	82.38	596	forward
CNT30143941	Glycine max	Medicago truncatula	34.94	54.91	87.4	246	forward
CNT30440797	Glycine max	Aegilops tauschii	84.66	81.87	83.22	596	forward
CNT30313757	Glycine max	Camelina sativa	31.53	25.31	84.68	222	forward
CNT3059659	Glycine max	Arabidopsis lyrata	31.11	50.46	80.37	219	forward
CNT30612508	Glycine max	Arabis alpina	36.65	10.17	82.56	258	forward
CNT30135610	Glycine max	Lolium perenne	30.11	25.06	85.38	212	forward
CNT3014085	Glycine max	Zea mays	78.69	90.82	81.95	554	forward
CNT30605685	Glycine max	Gossypium raimondii	50	46.07	84.94	352	forward
CNT30683923	Glycine max	Triticum urartu	49.72	38.25	83.14	350	forward
CNT30722731	Glycine max	Triticum spelta	31.25	43.05	80.45	220	forward
CNT30345702	Glycine max	Eragrostis tef	34.8	30.32	84.9	245	forward
CNT30361520	Glycine max	Sorghum bicolor	35.37	36.4	83.13	249	forward
CNT30596122	Glycine max	Oryza meridionalis	39.91	40.61	83.99	281	forward
CNT30369654	Glycine max	Oryza glumipatula	49.29	39.43	84.73	347	forward
CNT30154011	Glycine max	Prunus persica	8.66	21.71	88.52	61	forward
CNT30107537	Glycine max	Oryza longistaminata	67.61	51.8	84.24	476	forward
CNT30332479	Glycine max	Dioscorea rotundata	9.8	24.38	91.3	69	forward
CNT30149525	Glycine max	Brachypodium distachyon	16.48	38.41	81.9	116	forward
CNT30100253	Glycine max	Oryza rufipogon	84.66	54.08	82.38	596	forward
CNT30575129	Glycine max	Oryza barthii	84.66	73.22	82.21	596	forward
CNT30497701	Glycine max	Digitaria exilis	41.19	89.23	84.48	290	forward
CNT30116094	Glycine max	Oryza nivara	84.66	67.73	82.38	596	forward
CNT30604019	Glycine max	Oryza punctata	46.59	97.04	84.76	328	forward
CNT3050899	Glycine max	Cucumis sativus	19.03	53.17	85.82	134	forward

Expression of CNT30711584

Peptides detected in this lncRNA

>peptide 1 (71 aa)
MALMFSSAKAPSFDAHWNPATTESLISFKYWTPLHISTTMLGPRVSGPKHQIFLARSLSQPNSSDKILERIL

>peptide 2 (34 aa)
MGQKTSYPSDQRHIVGKPGLMLQPSMCSRNQRTQ*

Sequence

>CNT30711584
AAAACCACAAACAAAACTCGACAAAACTTAAATCTTAAGTAACATTGTTCATATGAGAAATAAATTCGGCTAAGTTCAAAAGTAAGTTAAATAGTTCAAA
CAATTTAAAGCTTGTCTTCAAACTCGGAGAGAGGAGTCATCTGTTCCTTCAAGCCCTTCCTCTTGCGGATGTCGGTGACAAGCTGTGCAGCTTGTGATCC
AGCCTCCAATGGGTCAGAAGACATCATATCCCAGTGATCAAAGACACATTGTGGGAAAGCCTGGCCTGATGTTGCAGCCCTCAATGTGCTCGAGAAACCA
AAGGACTCAATGACAGGGAGGTATGCTTTGATGTTGTAAAGTGGGGTACCAGGTAGACAGGCTCAAGAAGCCTGGGTTTGGCAGTAATCTGGGAAGCATA
GAAGACTCTCCTGGCAGTAGGGATGATTTGACCACCTCCTCTGTGGATAGCATCAGCGTGCAGAACAACATCACATACTTCAAAGCAAATGGCTCTCATG
TTTTCTTCGGCCAAAGCACCTTCTTTTGATGCCCACTGGAATCCAGCAACCACAGAATCCTTGATTTCATTCAAATACTGGACTCCCTTACACATATCAA
CCACCATGTTGGGTCCAAGGGTCTCAGGGCCAAAGCACCAGATTTTCTTGGCGAGATCCTTGTCCCAACCAAACTCTTCTGACAAGATCTTGGAGCGAAT
CTTG