Detailed information on CNT30711465


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30517286Glycine maxJuglans regia42.6136.9286.93199forward
CNT30525480Glycine maxPhaseolus vulgaris22.74.9686.79106forward
CNT30631135Glycine maxVigna unguiculata48.1819.1792225forward
CNT30502187Glycine maxNicotiana attenuata25.73.386.67120forward
CNT3042748Glycine maxPrunus dulcis15.6325.2693.1573forward
CNT30163276Glycine maxPistacia vera22.734.4288.68106forward
CNT30589490Glycine maxMusa acuminata21.8435.1782.35102forward
CNT3085870Glycine maxVigna radiata23.3424.8392.66109forward
CNT30261241Glycine maxBrassica rapa18.4223.6387.2186forward
CNT30613102Glycine maxArabis alpina19.493585.7191forward
CNT30227661Glycine maxAnanas comosus24.6350.4483.48115forward
CNT30479061Glycine maxArabidopsis halleri14.7822.8585.5169forward
CNT30595656Glycine maxOryza meridionalis17.1323.9586.2580forward
CNT30704968Glycine maxPrunus avium22.711.7586.79106forward

Expression of CNT30711465

Peptides detected in this lncRNA

>peptide 1 (57 aa)
MNRLIESLGLEGNGPDYDLVVECCKSCTDEWSLLKMIAAPRLRAGLIPVPVMGMVAK*

>peptide 2 (55 aa)
MVLVEDDSSTKTTSRVDTSSGDGDGCQVNQEHSEPNWQGCQNLLIYSTHTIRFSS*

Sequence

>CNT30711465
CCCACAAACATTGGCTTGATTTTTGTTGTTGTTGTTGTTCCCAACTTGATTAAGCATGAACCGTTTGATTGAATCACTTGGACTTGAAGGGAATGGCCCT
GATTACGACCTGGTGGTAGAGTGCTGCAAGAGCTGCACCGATGAATGGTCCTTGTTGAAGATGATAGCAGCACCAAGACTACGAGCAGGGTTGATACCAG
TTCCGGTGATGGGGATGGTTGCCAAGTGAACCAAGAACACAGCGAACCCAATTGGCAAGGGTGCCAAAATCTACTCATATATTCAACCCACACAATTAGA
TTTAGTTCATAATAAATGGTTTTTTTTTTTTTTGATGGCTATGTAATTTACATATCATCTAATCACAAATTCCTCCTAGATAATTATTTTAAAAGATAAC
AATTTTAACATATATGGAAGATTATGAAATCTCTGTTTAAGCATGGGGTCAATTTTATAATAAAAAA