Detailed information on CNT30711421


BLAST search results

BLAST vs Swiss-Prot:
sp|A2YWQ1|HSP81_ORYSI, E-value = 6e-49

BLAST vs NONCODE:
NONSLYT002404, E-value = 8e-41

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30675843Glycine maxSetaria viridis41.4628.2789.08119forward
CNT30517898Glycine maxJuglans regia49.8315.884.62143forward
CNT30378101Glycine maxArabidopsis thaliana62.3720.2984.92179forward
CNT3019970Glycine maxCitrullus lanatus46.6944.0886.57134forward
CNT30381504Glycine maxManihot esculenta68.6422.9986.29197forward
CNT30402788Glycine maxBeta vulgaris65.5114.9485.11188forward
CNT30631057Glycine maxVigna unguiculata62.3721.0388.83179forward
CNT30158908Glycine maxPistacia vera58.5410.2883.93168forward
CNT30305074Glycine maxTriticum aestivum65.5129.9886.7188forward
CNT30394033Glycine maxTriticum turgidum65.1613.8287.17187forward
CNT30560521Glycine maxActinidia chinensis64.4625.7383.78185forward
CNT3082269Glycine maxBrassica juncea31.3613.8984.4490forward
CNT3013256Glycine maxZea mays26.4819.3989.4776forward
CNT30652736Glycine maxRosa chinensis35.1917.4489.11101forward
CNT30625469Glycine maxDaucus carota65.5112.5782.98188forward
CNT30477326Glycine maxArabidopsis halleri63.0720.4888.4181forward
CNT3055928Glycine maxAmborella trichopoda25.788.4387.8474forward
CNT30323609Glycine maxAsparagus officinalis65.1611.2386.63187forward
CNT30103353Glycine maxOryza rufipogon51.9214.8487.92149forward
CNT30113681Glycine maxFicus carica31.7112.589.0191forward
CNT30724682Glycine maxLupinus angustifolius2326.9490.9166forward

Expression of CNT30711421

Peptides detected in this lncRNA

>peptide 1 (94 aa)
LKFLKLANSILINSINHVENLVSLLLKLFKEGGILDSFLAFTSNVVDVILSFLHPGNIVLEAEHLNALLDQVLPDDFQDLVLLQHFSRNVERKIL

>peptide 2 (29 aa)
MHFLTKFFLMTFRILFCCSISLEMLRGRSS

Sequence

>CNT30711421
CCTCAAATTCCTTAAGCTGGCCAACAGCATACTCATCAATAGCATCAACCATGTAGAGAACCTCGTATCCCTTCTTCTTAAGCTTTTCAAGGAAGGGGGA
ATTCTCGACAGCTTTCTTGCTTTCACCAGTAATGTAGTAGATGTCATTCTGTCCTTCCTTCATCCTGGTAACATAGTCCTTGAGGCTGAACATCTCAATG
CACTTCTTGACCAAGTTCTTCCTGATGACTTTCAGGATCTTGTTCTGCTGCAGCATTTCTCTAGAAATGTTGAGAGGAAGATCCTCA