Detailed information on CNT30711335


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONVVIT001054, E-value = 1e-86

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30641660Glycine maxNymphaea colorata94.6430.6193.8371forward
CNT30536068Glycine maxEucalyptus grandis95.1510.8393.83373forward
CNT30500477Glycine maxCoffea canephora94.6420.3795.15371reverse complement
CNT30730610Glycine maxCorchorus capsularis94.6434.994.61371reverse complement
CNT30632450Glycine maxVigna unguiculata97.4517.1892.93382reverse complement
CNT30196858Glycine maxPisum sativum94.6419.9892.99371reverse complement
CNT30503431Glycine maxNicotiana attenuata94.6426.8694.88371forward
CNT3044711Glycine maxPrunus dulcis94.6477.7895.15371forward
CNT3090649Glycine maxSolanum tuberosum94.6413.5794.88371reverse complement
CNT30588765Glycine maxMusa acuminata94.6453.1592.99371forward
CNT30511396Glycine maxSolanum lycopersicum77.8133.3389.84305reverse complement
CNT30257732Glycine maxAvena sativa36.2252.2195.07142forward
CNT30266045Glycine maxBrassica rapa56.3849.8991.4221reverse complement
CNT30655263Glycine maxRosa chinensis90.8219.7292.98356reverse complement
CNT30206293Glycine maxHelianthus annuus94.6416.8995.42371reverse complement
CNT30715515Glycine maxMalus domestica golden32.9164.1884.5129reverse complement
CNT30154922Glycine maxPrunus persica92.621.4990.08363forward
CNT30412183Glycine maxPapaver somniferum94.6413.1794.88371reverse complement
CNT30646402Glycine maxCannabis sativa86.4826.889.97339forward
CNT30332807Glycine maxDioscorea rotundata94.6422.4693.53371forward

Expression of CNT30711335

Peptides detected in this lncRNA

>peptide 1 (54 aa)
MSRQLILQQARGQSPEPPPTAWELTVSCSISLPDGGSFHPSLTVLLHYRSPRSI*

>peptide 2 (31 aa)
GLTLNICRFGPPLSFTQASSWSWIDHPGSGL*

>peptide 3 (40 aa)
MGVLFTLPSRYYFTIGHPGVFSLARWSLLIHTGFHVPHLNM

>peptide 4 (35 aa)
MFYFTPRWGFFSPFPHGTTSLSVTQEYLALQGGPC*

>peptide 5 (29 aa)
MDRSPRFGSISNDNCPVKIRFRYSFGGFP*

Sequence

>CNT30711335
GGATTAACACTGAACATCTGTCGGTTCGGACCTCCACTTAGTTTCACCCAAGCTTCATCCTGGTCATGGATAGATCACCCAGGTTCGGGTCTATAAGCAA
TGACAATTGCCCTGTGAAGATTCGCTTTCGCTACAGCTTCGGTGGTTTCCCTTAACCAAGCCACAACCTATGAGTCGCCAGCTCATTCTTCAACAGGCAC
GTGGTCAGAGTCCCGAGCCTCCTCCCACTGCTTGGGAGCTTACGGTTTCATGTTCTATTTCACTCCCCGATGGGGGTTCTTTTCACCCTTCCCTCACGGT
ACTACTTCACTATCGGTCACCCAGGAGTATTTAGCCTTGCAAGGTGGTCCTTGCTGATACACACGGGATTCCACGTGCCCCATCTTAATATG