Detailed information on CNT30711245


BLAST search results

BLAST vs Swiss-Prot:
sp|Q8RWE8|GGAP1_ARATH, E-value = 8e-61

BLAST vs NONCODE:
NONGMAT001348, E-value = 4e-71

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30729401Glycine maxCorchorus capsularis47.9218.8782.66173forward
CNT30381030Glycine maxManihot esculenta46.2639.6785.03167forward
CNT30172135Glycine maxTrifolium pratense43.7718.4186.71158forward
CNT30651855Glycine maxRosa chinensis96.9597.2277.71350forward
CNT30726833Glycine maxLupinus angustifolius41.8368.0287.42151forward

Expression of CNT30711245

Peptides detected in this lncRNA

>peptide 1 (56 aa)
MVNGCKSTQTVVTQSKIWIISFHCHVKCKEEALTVNPLRQTLENARNQQNMPILNRT

>peptide 2 (38 aa)
MDYQLPLPCEVQGGSSHGQSFEANTRKCAESAKHAHTQ*

Sequence

>CNT30711245
ACAGTCAGAGATAAGAACATTGAAAGGTATGTTGTTGTTCTGAAGACATATACAGGCATCTGAAACAACATTTGATAAATCTTCCAGCGTATCGCCACCC
TCAAAGACGAGACCTCTAACTGGATACTTCAACAGTTCAGATATCTTCACCCCACCATTTAAACTTGCAATTTTCTTAGTGGGGTGAAGATGGTTAATGG
TTGCAAAAGCACCCAAACTGTTGTAACCCAATCGAAAATATGGATTATCAGCTTCCACTGCCATGTGAAGTGCAAGGAGGAAGCTCTCACGGTCAATCCT
TTGAGGCAAACACTCGAAAATGCGCGGAATCAGCAAAACATGCCCATACTCAATAGGACTG