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Detailed information on CNT30711135


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONCQUT004405, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30639740Glycine maxNymphaea colorata65.5361.6793.422082reverse complement
CNT30531232Glycine maxEucalyptus grandis84.7779.5194.622693forward
CNT30318007Glycine maxCorylus avellana84.9977.2595.812700reverse complement
CNT30550163Glycine maxIpomoea triloba45.1170.9196.021433forward
CNT30519180Glycine maxJuglans regia84.8681.5295.292696forward
CNT30619309Glycine maxSesamum indicum55.8780.7995.11775reverse complement
CNT30283199Glycine maxChenopodium quinoa64.0974.8395.582036forward
CNT3021659Glycine maxCitrullus lanatus84.8663.3695.662696forward
CNT30730396Glycine maxCorchorus capsularis50.36100.3194.751600forward
CNT3072442Glycine maxQuercus suber54.5599.8392.441733forward
CNT30526827Glycine maxPhaseolus vulgaris39.4798.6699.521254reverse complement
CNT30632395Glycine maxVigna unguiculata84.8389.0697.772695forward
CNT30195048Glycine maxPisum sativum84.8671.6897.42696forward
CNT30508033Glycine maxNicotiana attenuata84.8380.9393.062695forward
CNT3047214Glycine maxPrunus dulcis65.2865.9293.922074forward
CNT30544747Glycine maxBrassica napus78.7597.793.532502reverse complement
CNT30234560Glycine maxBrassica oleracea53.0188.3193.111684reverse complement
CNT30312195Glycine maxCamelina sativa53.2967.8893.861693reverse complement
CNT3060563Glycine maxArabidopsis lyrata48.6670.5695.341546reverse complement
CNT3076930Glycine maxBrassica juncea84.5578.1793.342686forward
CNT30265711Glycine maxBrassica rapa78.8297.7493.532504forward
CNT30445720Glycine maxSaccharum spontaneum51.3476.6893.931631reverse complement
CNT30355977Glycine maxLactuca sativa48.1687.3893.531530forward
CNT30433917Glycine maxPapaver somniferum66.7677.8194.862121forward
CNT3023562Glycine maxPopulus trichocarpa48.6369.2296.51545reverse complement
CNT3035495Glycine maxCucumis melo84.8951.2195.252697forward

Expression of CNT30711135

Peptides detected in this lncRNA

>peptide 1 (85 aa)
MVAQARAVDMLVETSSSRLWMAARALGVPRHLRAPGVGLWAPHSARLETRTKESDMCASQRASKPVRRKEADWWDPPVGCTADRP*

>peptide 2 (55 aa)
MPRHLISDAHEWINEIPTVPVYYPAKPQPRERAWRNQRGKKTLLSLTLVRLCEMT*

>peptide 3 (87 aa)
MEQCRQGKSAKWIRNLGKRIGSEGWARGSQSRTRRLSVDCSSCFRGESGSSRAGRGTDWERALRGLFPGRRTVNSELVRTRGIRLFN*

>peptide 4 (40 aa)
MNRKLGYGAQLRANLDPTKGVGRLRQQDGGHGSRNPLRSV*

>peptide 5 (34 aa)
RRGYPLSLSISISGGKETNKDSLSNGERTGKSPP*

>peptide 6 (47 aa)
MSSTRTEISCGTKGQAFIATLLFDPSMSALPIIVKQNSPSVGLFTHQ*

>peptide 7 (43 aa)
MKRTLKESQRVLEIVGREADGGRRCVPVGCGTVRAGPPIDSGH*

>peptide 8 (34 aa)
MNGLTRFPLSLSTIQRNHSQGNGLGGISGERRPC*

>peptide 9 (33 aa)
MKIGRPRRPNCSLEKRPQWRTGPKSPGRGRQRG*

>peptide 10 (33 aa)
MCPGRMWNGESRSADRLGTLTDADCDGGPSPGC*

Sequence

>CNT30711135
AGGCGGGGCTACCCGCTGAGTTTAAGCATATCAATAAGCGGAGGAAAAGAAACTAACAAGGATTCCCTTAGTAACGGCGAGCGAACCGGGAAAAGCCCAC
CATGAAAATCGGTCGCCCTCGGCGTCCGAATTGTAGTCTGGAGAAGCGTCCTCAGTGGCGGACCGGGCCCAAGTCCCCTGGAAGGGGGCGCCAGAGAGGG
TGAGAGCCCCGTCGTGCCCGGACCCTGTCGCACCACGAGGCGCTGTCGGCGAGTCGGGTTGTTTGGGAATGCAGCCCCAATCGGGCGGTAATTCCGTCCA
AGGCTAAATACTGGCGAGAGACCGATAGCGAACAAGTACCGCGAGGGAAAGATGAAAAGGACTTTGAAAGAGAGTCAAAGAGTGCTTGAAATTGTCGGGA
GGGAAGCGGATGGGGGCCGGCGATGTGTCCCGGTCGGATGTGGAACGGTGAGAGCCGGTCCGCCGATCGACTCGGGACATTGACCGACGCGGATTGCGAT
GGTGGCCCAAGCCCGGGCTGTTGATATGCTCGTGGAGACGTCATCATCGCGATTGTGGATGGCAGCGCGCGCCCTTGGCGTGCCTCGGCACCTGCGCGCT
CCTGGCGTCGGCCTGTGGGCTCCCCATTCGGCCCGTCTTGAAACACGGACCAAGGAGTCTGACATGTGTGCGAGTCAACGGGCGAGTAAACCCGTAAGGC
GCAAGGAAGCTGATTGGTGGGATCCCCCTGTGGGTTGCACCGCCGACCGACCCTGATCTTCTGTGAAGGGTTCGAGTGAGAGCATACCTGTCGGGACCCG
AAAGATGGTGAACTATGCCTGAGCGGGGCGAAGCCAGAGGAAACTCTGGTGGAGGCCCGCAGCGATACTGACGTGCAAATCGTTCGTCTGACTTGGGTAT
AGGGGCGAAAGACTAATCGAACCGTCTAGTAGCTGGTTCCCTCCGAAGTTTCCCTCAGGATAGCTGGAGCCCGCGGGCGAGTTCTATCGGGTAAAGCCAA
TGATTAGAGGCATCGGGGGCGCAACGCCCTCGACCTATTCTCAAACTTTAAATAGGTAGGACGGTGCGGCTGCTCTGTTGAGCCGCGCCATGGAATCGAG
AGCTCCAAGTGGGCCATTTTTGGTAAGCAGAACTGGCGATGCGGGATGAACCGGAAGCTGGGTTACGGTGCCCAACTGCGCGCTAACCTAGACCCCACAA
AGGGTGTTGGTCGATTAAGACAGCAGGACGGTGGTCATGGAAGTCGAAATCCGCTAAGGAGTGTGTAACAACTCACCTGCCGAATCAACTAGCCCCGAAA
ATGGATGGCGCTAAAGCGCGCGACCTATACCCGGCCGTCGGGGCAAGGACCAAGCCCCGATGAGTAGGAGGGCGCGGCGGTCACTGCAAAACCCAGGGCG
CGAGCCCGGGCGGAGCGGTCGTCGGTGCAGATCTTGGTGGTAGTAGCAAATATTCAAATGAGAACTTTGAAGGCCGAAGAGGGGAAAGGTTCCATGTGAA
CGGCACTTGCACATGGGTTAGTCGATCCTAAGGGACGGGGGAAGCCCGTCTGATAGCGCTCTGTGCGCGTACTCCGAAAGGGAATCGGGTTAAAATTCCT
GAACCGGGACGTGGCGGCTGACGGCAACGTTAGGGAGTCCGGAGACGTCGGCGGGGGCCCCGGAAAGAGTTATCTTTTCTGTTTAACAGCCGGCCCACCC
TGGAAACGGCTCAGCCGGAGGTAGGGTCCAGCGGCTGGAAGAGCACCGCACGTCGCGTGGTGTCCGGTGCGCCCCCGGCGGCCCTTGAAAATCCGGAGGA
CCGAGTGCCTCCCACGCCCGGTCGTACTCATAACCGCATCAGGTCTCCAAGGTGAACAGCCTCTGGTCGATGGAACAATGTAGGCAAGGGAAGTCGGCAA
AATGGATCCGTAACCTCGGGAAAAGGATTGGCTCTGAGGGCTGGGCACGGGGGTCCCAGTCCCGAACCCGTCGGCTGTCGGTGGACTGCTCGAGCTGCTT
CCGCGGCGAGAGCGGGTCGTCGCGTGCCGGTCGGGGGACGGATTGGGAACGGGCCCTTCGGGGCCTCTTCCCCGGGCGTCGAACAGTCAACTCAGAACTG
GTACGGACAAGGGGAATCCGACTGTTTAATTAAAACAAAGCATTGCGATGGTCCCTGCGGATGTTGACGCAATGTGATTTCTGCCCAGTGCTCTGAATGT
CAAAGTGAAGAAATTCAACCAAGCGCGGGTAAACGGCGGGAGTAACTATGACTCTCTTAAGGTAGCCAAATGCCTCGTCATCTAATTAGTGACGCGCATG
AATGGATTAACGAGATTCCCACTGTCCCTGTCTACTATCCAGCGAAACCACAGCCAAGGGAACGGGCTTGGCGGAATCAGCGGGGAAAGAAGACCCTGTT
GAGCTTGACTCTAGTCCGACTTTGTGAAATGACTTGAGAGGTGTAGGATAAGTGGGAGCTGGAAACAGCGAAAGTGAAATACCACTACTTTTAACGTTAT
TTTACTTATTCCGTGAATCGGAAGCGGGGCACTGCCCCTCTTTTTGGACCCAAGGTCGGCTTCGGCCGGTCGATCCGGGCGGAAGACATTGTCAGGTGGG
GAGTTTGGCTGGGGCGGCACATCTGTTAAAAGATAACGCAGGTGTCCTAAGATGAGCTCAACGAGAACAGAAATCTCGTGTGGAACAAAAGGCCAAGCGT
TCATAGCGACGTTGCTTTTTGATCCTTCGATGTCGGCTCTTCCTATCATTGTGAAGCAGAATTCACCAAGTGTTGGATTGTTCACCCACCAATAGGGAAC
GTGAGCTGGGTTTAGACCGTCGTGAGACAGGTTAGTTTTACCCTACTGATGACAGTGTCGCAATAGTAATTCAACCTAGTACGAGAGGAACCGTTGATTC
ACACAATTGGTCATCGCGCTTGGTTGAAAAGCCAGTGGCGCGAAGCTACCGTGCGTTGGATTATGACTGAACGCCTCTAAGTCAGAATCCGGGCTAGAAG
CGACGCGTGCGCCCGCCGTCCGTTTGCCGACCAGCAGTAGGGGGCCTCGGCCCCCCAAAGGCACGTGCCGTTGGTGACCCTCGTGAGGCGGATTAGCCCT
ACGAGACGCCTTGAAGCGCAATTCCCATCGAGCGGCGGGTAGAATCCTTTGCAGACGACTTAAATACGCGACGGGGT