CANTATAdb - search

Detailed information on CNT30711124

BLAST search results

BLAST vs Swiss-Prot:
sp|O24370|LOX21_SOLTU, E-value = 2e-38

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30620387	Glycine max	Cajanus cajan	35.81	50.35	82.3	356	forward

Expression of CNT30711124

Peptides detected in this lncRNA

>peptide 1 (43 aa)
MAYLSNHHDPPLQVLSTKLGVQGLFGVPHLTCSRMRHILAPRT*

>peptide 2 (34 aa)
MTADISIEYLPHKNVFSIIPSALTRAFRARNRSL*

Sequence

>CNT30711124
CTCTTTATTAATGACAAATACAAATACATTCAGCCACTCCAAATACATGACTTAAGCATACACAACTGATTAAGGAATCTGGTTCCTTCAATTTCACATT
TATTTAAAACCAGGAACAGTACTTAAGCAACCATAGGGGTCTCCTTCTTGCCAGTAATAGTCTTCAAAAACTCCTTCTCAGGGTTCTTAGCCAACGCATC
ATATTCAGGAGACCCCTTTTCAGGCATGAATCTCCTGCTAATAGTTGGCCTGTTTAGGATTAAACCTCCATATGGATACTGTCCAAAGTTAACAGCAGCA
TGAAGGGCTGAAGCAATCCATATGAGGATAGCGGAAGCTTCAACCAACTCTTCACGAGTTTGCATCTTTTGCCACCATGGCTTATCTTTCAAATCACCAT
GACCCACCTCTACAAGTTCTTTCCACCAAGCTTGGAGTTCAGGGTCTTTTTGGAGTTCCTCATCTGACTTGTAGTAGAATGAGACATATTCTTGCACCCA
GGACTTGATGGCATCCCATATCTCTAGCCCATCAGAAGCATAAGGATAGTCCTCAATCAAAAGACGAACTCCATGGGGAGCAGATGGGTCCTTAACAGCA
ACTCCTCTGAATTAAAACAACCCGAATAGCACTAATTAGCATAAGAGTCATATCAAGCCTGATTCCTGAAGCCTTTTTTTCTTTTGTCGTTGATGACTTA
GATTTAGATTCTTTATTTTTAAGCGATATATATTTCTAATTTGTTGATAAACTTTAAAAGATTACTTACCTCTTTACAAGATCATTAGGTAATGCTTGAT
CAGTGAAAACCCAGTCCTTGTAAATGACAGCGGACATTTCCATAGAGTACCTACCCCACAAGAATGTTTTCTCTATAATACCATCTGCATTGACCAGGGC
TTTCCGGGCAAGAAACAGAAGTTTGTAAATAGGGTGAACCACACTCAGTTGCCTGTTTGTTGCTATGACAAATGGCTCAACAATTGCATGAGTG