« Back to Glycine max search


Detailed information on CNT30710884


BLAST search results

BLAST vs Swiss-Prot:
sp|P38417|LOX4_SOYBN, E-value = 4e-68

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30201872Glycine maxPisum sativum36.4179.2881.06264forward
CNT30172424Glycine maxTrifolium pratense10.6224.0689.6177forward
CNT30146892Glycine maxMedicago truncatula10.7621.5585.978forward

Expression of CNT30710884

Peptides detected in this lncRNA

>peptide 1 (43 aa)
MAYLSNHHDPPLQVLSTKLGVQGLFGVPHLTCSRMRHILAPRT*

Sequence

>CNT30710884
ACTGATTAAGGAATCTGGTTCCTTCAATTTCACATTTATTTAAAACCAGGAACAGTACTTAAGCAACCATAGGGTCCTTAGATAGAGATACTGTTGGGAA
TTCCTCTGAAAGTCAATCCCTCCTCACTAGAAGGATAGAGCAGAGTGTAAGGCATTTTAGCTGGCCCATAGCGGTTTCTCAATGTCTCATCTTTGTTCTT
CTCTATAAGCTTCTTTTCAATCTCTTCAAGCTTCTTTCCAAACCTCTTAAATGCCTCTAATGGACCGGCATCAGAAGCATGAATCTCCTGCTAATAGTTG
GCCTGTTTAGGATTAAACCTCCATATGGATACTGTCCAAAGTTAACAGCAGCATGAAGGGCTGAAGCAATCCATATGAGGATAGCGGAAGCTTCAACCAA
CTCTTCACGAGTTTGCATCTTTTGCCACCATGGCTTATCTTTCAAATCACCATGACCCACCTCTACAAGTTCTTTCCACCAAGCTTGGAGTTCAGGGTCT
TTTTGGAGTTCCTCATCTGACTTGTAGTAGAATGAGACATATTCTTGCACCCAGGACTTGATGGCATCCCATATCTCTAGCCCATCAGAAGCATAAGGAT
AGTCCTCAATCAAAAGACGAACTCCATGGGGAGCAGATGGGAAACAGAAGTTTGTAAATAGGGTGAACCACACTCAGTTGCCTGTTTGTTGCTATGACAA
ATGGCTCAACAATTGCATGAGTGCT