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Detailed information on CNT30710849


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9S7M0|CB3_ARATH, E-value = 5e-86

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30629897Glycine maxVigna unguiculata28.5728.0893.02344forward

Expression of CNT30710849

Peptides detected in this lncRNA

>peptide 1 (35 aa)
MWFYTSKNSAMVLATGTKTFTFMYVWELKLTVFIV*

>peptide 2 (47 aa)
MASLPFLISLTLSSAKVTGSSARPSGITWKPSTARMLCAWTRFGFPK*

Sequence

>CNT30710849
CTTCAGACAAAAACTAGATCAACAAACAAGGGCATCCCAGGTTTAAATTGAACCTTAGTCCTTAAGAAGTACACTAATCCAACAATTATTATGATCATAT
AATCTACACATAAATCACAAAGGCAAACACAAGGGATATGATCATAGGGATTAGGGAAGAAGAAGTCATATACATTTAAGATCCTGGGGCAAACTTAGTG
GCATAGACCCAAGCATTGTTAGCCACAGGGTTGTCAAGGTGGTCCAAGAGGTTCTCCAATGGGCCTTTTCCAGTGACAATAGCTTGAACAAAGAATCCAA
ACATAGAGAACATGGCCAGCCTTCCATTCTTGATCTCCTTGACTTTGAGCTCAGCAAAAGTGACTGGGTCATCAGCAAGGCCCAGTGGGATAACTTGGAA
GCCCAGCACTGCCAGGATGCTTTGTGCATGGACAAGGTTTGGGTTCCCCAAATAGTCAAGCCCACCTTCTGAGAATATTTGGGCTCCAGCTTTGAACCAC
ACTGGCTCCTTGAAGTCCACTCTCAACCACTTCTCTAGCACCTCTGGGGTGATGCATCCTAGTGCTCCAAGCATGGCCCATCTCCCATGGATAACCTTAT
TCCACATAATAATTTAGTGTTTATCATTGGAAAAAAAATCACTTCGATTAAATTATGACACTTGATATGTATGATCCCCTTGTTGAACAAATTTAACAAA
TGTTCAAACTATTCACTTAGTTCCTATAATTGTCTTTAAATTTTTAGTTTCTATAAAGAAAATTGTAACTTTATTCCCACGGAATTTTTTGTAGCAGTTT
ATCACTATGTGGTTTTACACTTCCAAAAATTCTGCTATGGTGTTAGCCACAGGAACCAAAACTTTTACTTTTATGTATGTGTGGGAACTAAAACTTACAG
TTTTTATTGTATAAAGATTAAAACATAAAATGAAGACAGCTATAAGAATTGCTGAATAATTTAACCTTAACAATTTAAGAGTAGTAACAAGTAATAGTCA
AAATAAAATTTGCTACATCATTGGTCTCACTATGACAAATGATACTAGTCCTGCATGAAATTAAGATTCTTGTTGTAAAAGAGCAATAGAAGTCTAGAAC
CTTAAAACTAAAGTAAAACTAGTTAGAACCTTCAGTACTACACTAAATTAGTTTTAAAAAAAGAATGAGAAAGAACCATTATATTTGAGTTTAAGGCTAA
AAAA