CANTATAdb - search

Detailed information on CNT30710826

BLAST search results

BLAST vs Swiss-Prot:
sp|P13951|RBS_SINAL, E-value = 2e-44

BLAST vs NONCODE:
NONCQUT001608, E-value = 1e-35

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30146145	Glycine max	Medicago truncatula	22.48	18.27	83.51	194	forward

Expression of CNT30710826

Peptides detected in this lncRNA

>peptide 1 (50 aa)
MSLLVFLVGKPAMDLRPVNGATMPAPARLTVVTAGEEIIEEAISFFLVLNY

>peptide 2 (74 aa)
MLCKFFNDLEAWGLVGDEADALHLANVVKSNDTDEAIGVCSLSLLKLLQHLRSISAAKHRQLPHGPVASIIVSR*

Sequence

>CNT30710826
ATACAGGATGATGAAATCTCATAAAGCAAAAACAAATGGGAATGTAGTTTAAGTACAACAAACAAAGTGGGGTGGCTACAGATGCTTTGCAAATTTTTCA
ATGACTTAGAAGCCTGGGGGCTTGTAGGCGATGAAGCTGATGCACTGCACTTGGCGAACGTTGTCAAATCCAATGATACGGATGAAGCCATTGGGGTATG
CAGTCTTAGCCTCTTGAAGCTCCTTCAACACCTGAGAAGCATCAGTGCAGCCAAACATAGGCAGCTTCCACATGGTCCAGTAGCGTCCATCATAGTATCC
AGGTGACCTGTTGTGCTCACGGTACACGAAACCGTGCTATATACAAACACAACAAACATATCAACCATCAAAACTCAAAACCAAGTGCTTGTTTTGTAAT
AATAGGGACAGATTTGATCAATATTGATAAGTCTGAGATAGAAAAATCCATTAGATAAACTTAAATTTTGGAAAACAACCACTTCTCTTTTTTTTTTTTT
TTTTTTTGTTTCCAAAAGTACTTTTAGCACGCCAGCAAGAGAAGCGATTATTTCTTCAAAATAAGTTGAAACAAACTAAGACTAAGAAACTATAATTAAA
CCAAAAGGGGTTGCAAGAAATTGACCTCCAACTCGAATTCCAAGCAAGGAATCCATCCTTTCCTTAGAAGGTATTCGACTTCCTTTGCCAATTGGGCATC
ATCGAGGTAATGTCATTGTTGGTCTTCCTCGTGGGGAAGCCAGCCATGGATTTGAGGCCGGTGAATGGAGCAACCATGCCGGCACCGGCACGGTTGACGG
TGGTAACAGCTGGGGAGGAGATCATTGAGGAAGCCATTTCCTTCTTCTTAGTTCTCAACTACT