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Detailed information on CNT30710708


BLAST search results

BLAST vs Swiss-Prot:
sp|P85955|DRE1_PSEMZ, E-value = 9e-07

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30630024Glycine maxVigna unguiculata26.5416.5589.44142forward
CNT30474096Glycine maxSaccharum spontaneum16.2622.8385.0687forward

Expression of CNT30710708

Peptides detected in this lncRNA

>peptide 1 (66 aa)
ENQISLHESGNLRERRHVQVKIKEHAAVVIGIGVVTAEISGGAFKATHLAAGDGDHGVRTRERVKE*

>peptide 2 (95 aa)
MASARANASKNRTGRATGKTVTATERGVRVRSSGGGGDGGEEESRVLLWLGLRMLLLRMSAEPDARFLAGVADLGGVAAPGAFPDASVADLFVGR*

Sequence

>CNT30710708
GGAAAACCAGATCTCCCTGCATGAATCAGGCAACCTCCGGGAGAGGAGGCACGTTCAGGTCAAGATCAAGGAGCACGCGGCGGTTGTAATCGGAATCGGA
GTCGTTACGGCGGAAATCAGCGGCGGGGCGTTCAAAGCCACACATCTCGCGGCGGGAGACGGCGATCATGGCGTCCGCACGCGCGAACGCGTCAAAGAAT
AGAACCGGACGAGCCACCGGGAAGACGGTGACGGCCACGGAGAGAGGGGTTAGGGTAAGGTCAAGCGGCGGTGGCGGTGACGGGGGAGAGGAAGAGTCGA
GGGTGCTGCTCTGGCTGGGACTGCGAATGTTGTTGTTAAGGATGAGTGCCGAGCCAGACGCGCGTTTTCTTGCCGGGGTCGCGGATCTCGGCGGCGTAGC
GGCCCCAGGGGCGTTTCCGGACGCCTCGGTAGCGGATCTCTTTGTGGGCCGGTGATGGGCCTGGGCCTGGTCCGGCGAACGCGGTGGCTCGGCTGTCTCT
TGGGGCCATTGTTGGTGCGAGTTTTTAATTTTGAT