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Detailed information on CNT30710483


BLAST search results

BLAST vs Swiss-Prot:
sp|P84977|GRP3_POPEU, E-value = 2e-12

BLAST vs NONCODE:
NONGMAT000264, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30172764Glycine maxTrifolium pratense15.7733.7184.17120forward

Expression of CNT30710483

Peptides detected in this lncRNA

>peptide 1 (40 aa)
MKSKTARKQKPEPNRNRSIFFFGKKMKMNVPIGVSNKRII*

>peptide 2 (56 aa)
MEKFRIRIVSDHMRCGPSIQRRHRTERRLSPDRSCQWPKRAHQQSIGIQHPQKPWKF

Sequence

>CNT30710483
GAGCCCCAAACCAAGACAAATTACCAAACCGTAACACCTAAAATTACGGAACACAAACATAGCAATAAACACTAATCTACAACATTAAGCCCTAATTTCT
CCAGCTTCCATCACCACCACCACGAGAGTAGCGTGATCCACCGTCCCCGTAAGCACCACCACTGCGGTTGTATCCACCGCCACTTCCGTAACCGCCACCG
CCTCCACCGCGGCTTCCGCGGGACTGAGCTTCGTTCACAGTGATGTTGCGTCCATCAAGGTTCTGACCGTTCATCCCTTCGATCGCATCCCTCATTGAAT
CCTCGGAGGCGAAGGTAACAAATCCAAATCCCCTGGATCTTCCAGTCTCACGATCGTTGATAATCTACACATAAAACCACAAACGGTTCATCAAATTGAA
ATGAAAAGCAAAACAGCACGAAAACAAAAACCAGAACCGAATAGAAACCGATCGATCTTCTTCTTTGGCAAAAAGATGAAGATGAACGTACCTATTGGCG
TGAGTAATAAAAGAATCATATAGTAACACAAGTATCATATCATAGAACAAGTAACGCAAATAGATCAGAGATCACAGATCAGAACGGGATGGAGAAATTC
CGGATCCGAATTGTGTCAGATCATATGCGATGCGGACCTTCGATTCAACGACGTCACCGTACTGAGAGAAGGCTTTCTCCAGATCGTAGTTGTCAGTGGC
CCAAGCGAGCCCACCAACAAAGCATCGGTATTCAACATCCGCAGAAGCCATGGAAATTTGG