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Detailed information on CNT30710470


BLAST search results

BLAST vs Swiss-Prot:
sp|O65660|PLAT1_ARATH, E-value = 2e-50

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30549214Glycine maxIpomoea triloba20.416.6982.14112forward
CNT30198814Glycine maxPisum sativum40.2652.4981.45221forward

Expression of CNT30710470

Peptides detected in this lncRNA

>peptide 1 (45 aa)
NNSVLARQNKLKEDASTNLTKSIMSQKTYVSQQHYRHSSRATNIT*

Sequence

>CNT30710470
AACAATTCTGTTCTAGCGAGACAGAACAAGCTTAAGGAGGACGCAAGTACAAACCTCACCAAAAGTATTATGTCCCAAAAAACATATGTTTCCCAACAAC
ACTACCGACACTCAAGTAGAGCAACCAACATAACCTAGACGCGGACGGTGGATTCCAGAATAGAGAAAGCAGGCCCAGCCCGAGGGATGGCAACATCGGT
GAGCTGGGCCGGGCCCAAGTTGTTTGGACAGTTGTTCCTGACAGCCCAGAGCTGATACGGCGACGTATCGGTGGCGAGCCACTGCTCAAAGGTGAACTGC
TGCTGAGAACAAGGCGCGTGGACCCCAGTGGTGGTGACCTCGACGTAATTAACGTACCAGCCGTGATGGGGCCCCGACCCGTCAGAAGTTAGGTTGGCCT
CGCAAACGGGTGCTTCCAAGCAAGGGCCTCTACCACTGAATATGTCGAGGTTGGTGATGTATATGCCGTAGCCGGACTTGTCGTATAGCTTCAGACCAAT
TACTGAATCGGTGCCTCCCTTGATGATCGAACCCGTCCGAACGTACACC