CANTATAdb - search

Detailed information on CNT30710461

BLAST search results

BLAST vs Swiss-Prot:
sp|P84977|GRP3_POPEU, E-value = 2e-13

BLAST vs NONCODE:
NONGMAT000264, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30526705	Glycine max	Phaseolus vulgaris	32.35	46.9	88.13	219	forward
CNT30632012	Glycine max	Vigna unguiculata	61	93.65	82.81	413	forward
CNT30620238	Glycine max	Cajanus cajan	63.37	42.81	85.78	429	forward

Expression of CNT30710461

Peptides detected in this lncRNA

>peptide 1 (59 aa)
MLRPSRSWPFIPAIASFIDCSEAKVTNPNPLDLPVSRSLITCTQKHDASDPKQKKKHEN*

>peptide 2 (32 aa)
RDHHHHIHHRDHHHIHHLHRLRRHRHHGTELR*

>peptide 3 (53 aa)
TATTTTISTTATTTISTTSTASAATATTGLSFVNSDVTAVKVLAVHSCDRIFH*

>peptide 4 (29 aa)
PRPPPPYPPPRPPPYPPPPPPPPPPPPRD*

Sequence

>CNT30710461
ACCGCGACCACCACCACCATATCCACCACCGCGACCACCACCATATCCACCACCTCCACCGCCTCCGCCGCCACCGCCACCACGGGACTGAGCTTCGTTA
ACAGTGATGTTACGGCCGTCAAGGTCCTGGCCGTTCATTCCTGCGATCGCATCTTTCATTGACTGCTCTGAGGCGAAGGTCACAAATCCGAATCCTCTGG
ACCTTCCAGTCTCACGGTCGTTGATAACCTGCACACAAAAACACGATGCATCAGATCCAAAGCAAAAGAAAAAACACGAAAACTAACGACAGAACCGAAT
AGAAACCGATCGATCTTCGCCTTTGGTGAAAGGAAGAAGATGAACGTACCTATTGGCGTGAGTAATAAAAGAATCATATAGTAACACAAGTATCATATCA
TAGATCAAGTAACGCAAATAGATCAGAGATCACAGATCAGAAGAGGATCGAGAAAAAATCCGAATCCGAATCGTGTGAGATCAGTTGCGGTGCCTGCATC
AAACGGACCTTCGATTCAACGATGTCGCCGTAGATTGAAAAGGCTTTCTCGAGGGCATCGTTGCCGGTGACCCAAGCAAGCCCACCAACAAAGCAACGGA
ACTCAACATCTGCAGAAGCCATTGAAAAATAGTAGAAATTTGCAACAGCTAGAGTGATTAGAGGGATAAGATAAGAT