Detailed information on CNT30710437


BLAST search results

BLAST vs Swiss-Prot:
sp|P84977|GRP3_POPEU, E-value = 2e-14

BLAST vs NONCODE:
NONGMAT000264, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30615905Glycine maxSesamum indicum20.189.0583.1589forward
CNT3060770Glycine maxArabidopsis lyrata23.5831.2382.69104forward
CNT30724703Glycine maxLupinus angustifolius29.9341.1284.09132forward

Expression of CNT30710437

Peptides detected in this lncRNA

>peptide 1 (72 aa)
MVSVTAITTTVTVICTFPTATVSSSTTTAVVSTATSVTATASTAASAGLSFVHSDVASIKVLTVHPFDRILH*

>peptide 2 (40 aa)
MHLPDGHRILQHHHCGCIHRHFRNRHRLHRGFRGTELRSQ*

Sequence

>CNT30710437
CCAGGAGCCCCAAACCAAGACAAATTACCAAACCGTAACACCTAAAATTACGGAACACAAACATAGCAATAAACACTAATCTACAACATTAAGCCCTAAT
TTCTCCAGCTTCCATCACCACCACCACGAGAGTAGCGTGATCCACCGTCCCCGTAAGGTCCGTAACGATGGTCTCTGTCACCGCCATAACCACCACCGTT
ACGGTTATATGCACCTTCCCGACGGCCACCGTATCCTCCAGCACCACCACTGCGGTTGTATCCACCGCCACTTCCGTAACCGCCACCGCCTCCACCGCGG
CTTCCGCGGGACTGAGCTTCGTTCACAGTGATGTTGCGTCCATCAAGGTTCTGACCGTTCATCCCTTCGATCGCATCCTTCATTGAATTCTCCGAGGCGA
AGGTAACAAATCCAAATCCCCTGGACCTTCCGGTCTCACGA