Detailed information on CNT30710435


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONGMAT000067, E-value = 2e-138

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30727661Glycine maxCorchorus capsularis79.3873.1678.82458forward
CNT30554580Glycine maxOryza glaberrima35.1829.8584.24203forward
CNT30442780Glycine maxAegilops tauschii44.8932.6680.69259forward
CNT30216752Glycine maxKalanchoe fedtschenkoi52.8665.8780.66305forward
CNT30713436Glycine maxMalus domestica golden32.5858.3982.45188forward
CNT30642027Glycine maxCannabis sativa99.1389.6680.07572forward

Expression of CNT30710435

Peptides detected in this lncRNA

>peptide 1 (32 aa)
VMWDYMDLMETISDCLENMLTKDYTLLTVDCN*

>peptide 2 (31 aa)
GDVGLYGLDGDNLGLLGEYANEGLYFADCGL*

Sequence

>CNT30710435
CGGTGATGTGGGACTATATGGACTTGATGGAGACAATCTCGGACTGCTTGGAGAATATGCTAACGAAGGACTATACTTTGCTGACTGTGGATTGTAACTA
GGGGAAGTAGGGCTATACGATGGCGAGGTTGGGCTATATGAGGGTGAGGTTGGGCTGTATCCAGGCGATGTGGGGCTGTAAGCAGGTGATGTAGGACTAT
ATGATGGAGATGTTGGACTGTAAGAGGGTGATGTAGGGCTGTAGGAAGGTGAAGTTGGACTATAAGAAGGAGAAGTCGGACTATAGGAAGGAGATGTGGG
GCTGTAGCTGGGTGATGTAGGGCTGTAGCTGGGTGATGTAGGACTGTAGCTGGGTGATGTGGGAGAGTAGGATGGACTGGTAGGCGAATAAGCTGGACTT
GTAGGACTATATCCCGGAGAGCTAGGACTATAAGTCGGAGAGGTGGGACTGTACCCAGGTGACGTGGGACTGTACCCGGGTGACGTGGGGCTGTATCCGG
GTGAAGTGGGACTGTACCCGGGTGATGAGGGACTATAGCCTGGGGATGATGGGCTGTAACCAGGAGATGAAGTAGGA