Detailed information on CNT30710344


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30554166Glycine maxOryza glaberrima22.1510.9688.57105forward
CNT3082983Glycine maxBrassica juncea38.47.5886.26182forward
CNT3018154Glycine maxZea mays25.9510.7987.8123forward
CNT30606970Glycine maxGossypium raimondii35.861085.88170forward
CNT30416813Glycine maxPapaver somniferum38.48.1582.97182forward
CNT30104429Glycine maxOryza rufipogon22.1515.9188.57105forward
CNT30726985Glycine maxLupinus angustifolius42.199.2587.5200forward

Expression of CNT30710344

Peptides detected in this lncRNA

>peptide 1 (29 aa)
IRPSATLITTALTRLFPNNCCTSQVTLIC*

Sequence

>CNT30710344
TCATTAGACCATCTGCCACACTCATAACTACAGCTCTAACTCGATTATTTCCTAATAATTGTTGTACTTCACAAGTCACGTTAATTTGTTGACCAGCAGT
ATCTCGACCCTTAACTATCAAAGAAGTGTAAATATTAGGCATCTTCCCTAAGGAAAAGCTACATCTAGTACTGGACCAATTATTTGGGTGATATGTCCCA
GATTTTTTTTTCAAGTGCAAAAACCTCAAGACCGGAAGTAGTAGGATTGATTCGCATATAAAAATAGATTCAAATTTTTTCCGGAAAATTTTTGAAATCA
AAAAGAAATGTTGCGACACAAAGCAAGTTGATCAGTTAATTCAATAATAAATCAAAAATGGGAGTTAGTACTCCATTTTTATGATACCATTCGACCAATC
CAATTAAATTGTTTACTTATTCAATTTCAATAATTGAATTCTTAAGTTTATCCCAATCATTTTTTGGTGTAGAA