Detailed information on CNT30710271


BLAST search results

BLAST vs Swiss-Prot:
sp|P32869|PSAD_CUCSA, E-value = 3e-65

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30677834Glycine maxSetaria viridis32.9334.682.93164forward
CNT30522550Glycine maxSetaria italica55.2257.7782.18275forward
CNT30298930Glycine maxTriticum aestivum36.3521.7883.98181forward
CNT30171560Glycine maxTrifolium pratense38.3523.784.82191forward
CNT30666088Glycine maxTriticum dicoccoides36.3522.5783.98181forward
CNT30446699Glycine maxSaccharum spontaneum46.1825.6481.74230forward
CNT3010182Glycine maxZea mays51.6132.7482.49257forward
CNT30477824Glycine maxArabidopsis halleri31.1246.5581.94155forward
CNT30361538Glycine maxSorghum bicolor48.850.181.48243forward
CNT3035037Glycine maxCucumis melo21.083582.86105forward
CNT30148465Glycine maxBrachypodium distachyon32.9321.1381.1164forward
CNT30579356Glycine maxEchinochloa crusgalli54.6231.5582.72272forward

Expression of CNT30710271

Peptides detected in this lncRNA

>peptide 1 (31 aa)
IIITKIAKKKCKIKVQSLSNICGIIKLTIGT*

Sequence

>CNT30710271
AAATAATAATCACCAAAATAGCGAAAAAGAAGTGTAAAATTAAGGTACAGAGTTTAAGCAATATTTGTGGCATAATAAAATTGACAATAGGTACATGATA
TCACATGAGAATATATAGCATATAAAGGAAGCACGGGGGATGATGATGATGAAGATAGAGTTGTGGTGCAAATACTGAACCTCCCCATTAGGGAAGACCC
TGTAGAACTGGTACTTGATCTTGTACTTGGACCTGAGCCTAGTCCCAAGAGCCAAGCACTGCTCCTTCCTGGCCAACTTGAGAAGGTTAGGACCCTCCCT
CATGATAGCGGCGCCGCCAGTGGGCATTTCAAAGATCTGTTCTTTGGGTGAGTCCCACGTAATGACATAAAACTCCTCCACCTGTGCCTTGCGCAGGAGC
CCGCCGGTGCTGCCCCCGAAGATCGGGGAAGGGGTGTTTGGGTCAAGTTCTGGTGGGGCTTGGGTTGCCATTGCCATGGTTGCTTGAGACAATACAAG